PomBase home

Reference - PMID:20211136 - Stc1: a critical link between RNAi and chromatin modification required for heterochromatin integrity.

Reference summary

PubMed ID
PMID:20211136
Title
Stc1: a critical link between RNAi and chromatin modification required for heterochromatin integrity.
Authors
Bayne EH, White SA, Kagansky A, Bijos DA, Sanchez-Pulido L, Hoe KL, Kim DU, Park HO, Ponting CP, Rappsilber J, Allshire RC
Citation
Cell 2010 Mar 05;140(5):666-77
Publication year
2010
Abstract
In fission yeast, RNAi directs heterochromatin formation at centromeres, telomeres, and the mating type locus. Noncoding RNAs transcribed from repeat elements generate siRNAs that are incorporated into the Argonaute-containing RITS complex and direct it to nascent homologous transcripts. This leads to recruitment of the CLRC complex, including the histone methyltransferase Clr4, promoting H3K9 methylation and heterochromatin formation. A key question is what mediates the recruitment of Clr4/CLRC to transcript-bound RITS. We have identified a LIM domain protein, Stc1, that is required for centromeric heterochromatin integrity. Our analyses show that Stc1 is specifically required to establish H3K9 methylation via RNAi, and interacts both with the RNAi effector Ago1, and with the chromatin-modifying CLRC complex. Moreover, tethering Stc1 to a euchromatic locus is sufficient to induce silencing and heterochromatin formation independently of RNAi. We conclude that Stc1 associates with RITS on centromeric transcripts and recruits CLRC, thereby coupling RNAi to chromatin modification.

Annotation

GO biological process

GO:0031048 - regulatory ncRNA-mediated heterochromatin formation

Genes:

GO:0030466 - silent mating-type cassette heterochromatin formation

Genes:

GO:0140727 - siRNA-mediated pericentric heterochromatin formation

Genes:

GO:0031509 - subtelomeric heterochromatin formation

Genes:

GO cellular component

GO:0005721 - pericentric heterochromatin

Genes:

GO molecular function

GO:0030674 - protein-macromolecule adaptor activity

Genes:

Multi-locus phenotype

FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

Genes:

Genotypes:

Single locus phenotype

FYPO:0004170 - abolished histone H3-K9 dimethylation at centromere during vegetative growth

Genes:

Genotypes:

FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

Genes:

Genotypes:

FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

Genes:

Genotypes:

FYPO:0000888 - decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

Genes:

Genotypes:

FYPO:0001861 - increased minichromosome loss upon segregation during vegetative growth

Genes:

Genotypes:

FYPO:0004237 - increased protein localization to heterochromatin at centromere outer repeat region

Genes:

Genotypes:

FYPO:0000228 - lagging mitotic chromosomes

Genes:

Genotypes:

FYPO:0002837 - normal centromeric outer repeat transcript-derived siRNA level

Genes:

Genotypes:

FYPO:0002336 - normal chromatin silencing at silent mating-type cassette

Genes:

Genotypes:

FYPO:0003555 - normal chromatin silencing at subtelomere

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes: