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Reference - PMID:20661445 - Rad3 decorates critical chromosomal domains with gammaH2A to protect genome integrity during S-Phase in fission yeast.

Reference summary

PubMed ID
PMID:20661445
Title
Rad3 decorates critical chromosomal domains with gammaH2A to protect genome integrity during S-Phase in fission yeast.
Authors
Rozenzhak S, Mejía-Ramírez E, Williams JS, Schaffer L, Hammond JA, Head SR, Russell P
Citation
PLoS Genet 2010 Jul 22;6(7):e1001032
Publication year
2010
Abstract
Schizosaccharomyces pombe Rad3 checkpoint kinase and its human ortholog ATR are essential for maintaining genome integrity in cells treated with genotoxins that damage DNA or arrest replication forks. Rad3 and ATR also function during unperturbed growth, although the events triggering their activation and their critical functions are largely unknown. Here, we use ChIP-on-chip analysis to map genomic loci decorated by phosphorylated histone H2A (gammaH2A), a Rad3 substrate that establishes a chromatin-based recruitment platform for Crb2 and Brc1 DNA repair/checkpoint proteins. Unexpectedly, gammaH2A marks a diverse array of genomic features during S-phase, including natural replication fork barriers and a fork breakage site, retrotransposons, heterochromatin in the centromeres and telomeres, and ribosomal RNA (rDNA) repeats. gammaH2A formation at the centromeres and telomeres is associated with heterochromatin establishment by Clr4 histone methyltransferase. We show that gammaH2A domains recruit Brc1, a factor involved in repair of damaged replication forks. Brc1 C-terminal BRCT domain binding to gammaH2A is crucial in the absence of Rqh1(Sgs1), a RecQ DNA helicase required for rDNA maintenance whose human homologs are mutated in patients with Werner, Bloom, and Rothmund-Thomson syndromes that are characterized by cancer-predisposition or accelerated aging. We conclude that Rad3 phosphorylates histone H2A to mobilize Brc1 to critical genomic domains during S-phase, and this pathway functions in parallel with Rqh1 DNA helicase in maintaining genome integrity.

Annotation

GO cellular component

GO:0000775 - chromosome, centromeric region

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GO:0099115 - chromosome, subtelomeric region

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GO:0140445 - chromosome, telomeric repeat region

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GO:0031934 - mating-type region heterochromatin

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GO:0005634 - nucleus

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GO:0005721 - pericentric heterochromatin

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GO:0033553 - rDNA heterochromatin

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Modification

MOD:00696 - phosphorylated residue

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Single locus phenotype

FYPO:0000670 - abnormal mitotic sister chromatid separation

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FYPO:0002603 - abolished histone H2A phosphorylation at mating type locus during mitotic S phase

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FYPO:0001407 - decreased cell population growth on glucose carbon source

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FYPO:0002609 - decreased histone H2A phosphorylation at centromere outer repeat during vegetative growth

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FYPO:0002611 - decreased histone H2A phosphorylation at subtelomeric heterochromatin during mitotic S phase

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FYPO:0002602 - decreased histone H2A phosphorylation during mitotic S phase

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FYPO:0000450 - decreased protein localization to centromere during vegetative growth

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FYPO:0002387 - decreased protein localization to subtelomeric heterochromatin during vegetative growth

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FYPO:0002624 - decreased punctate nuclear protein localization

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FYPO:0002607 - increased histone H2A phosphorylation at centromeric tDNA during mitotic S phase

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FYPO:0002605 - increased histone H2A phosphorylation at rDNA during mitotic G2 phase

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FYPO:0002606 - increased histone H2A phosphorylation at rDNA during mitotic S phase

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FYPO:0002604 - increased histone H2A phosphorylation at rDNA during vegetative growth

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FYPO:0002608 - increased histone H2A phosphorylation during cellular response to hydroxyurea

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0000963 - normal growth on hydroxyurea

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FYPO:0002610 - normal histone H2A phosphorylation at centromere outer repeat during vegetative growth

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FYPO:0002613 - normal histone H2A phosphorylation at mating type locus during vegetative growth

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FYPO:0002612 - normal histone H2A phosphorylation at subtelomeric heterochromatin during vegetative growth

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FYPO:0002625 - normal protein localization to chromatin rDNA

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FYPO:0000085 - sensitive to camptothecin

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0001492 - viable elongated vegetative cell

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