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Reference - PMID:20924116 - Fission yeast Swi1-Swi3 complex facilitates DNA binding of Mrc1.

Reference summary

PubMed ID
PMID:20924116
Title
Fission yeast Swi1-Swi3 complex facilitates DNA binding of Mrc1.
Authors
Tanaka T, Yokoyama M, Matsumoto S, Fukatsu R, You Z, Masai H
Citation
J Biol Chem 2010 Dec 17;285(51):39609-22
Publication year
2010
Abstract
Replication fork protection complex Swi1-Swi3 and replication checkpoint mediator Mrc1 are required for maintenance of replication fork integrity during the course of DNA replication in the fission yeast Schizosaccharomyces pombe. These proteins play crucial roles in stabilizing stalled forks and activating replication checkpoint signaling pathways. Although they are conserved replication fork components, precise biochemical roles of these proteins are not known. Here we purified Mrc1 and Swi1-Swi3 proteins and show that these proteins bind to DNA independently but synergistically in vitro. Mrc1 binds preferentially to arrested fork or D-loop-like structures, although the affinity is relatively low, whereas the Swi1-Swi3 complex binds to double-stranded DNA with higher affinity. In the presence of a low concentration of Swi1-Swi3, Mrc1 generates a novel ternary complex and binds to various types of DNA with higher affinity. Moreover, purified Mrc1 and Swi1-Swi3 physically interact with each other, and this interaction is lost by mutations in the known DNA binding domain of Mrc1 (K235E,K236E). The interaction is also lost in a mutant form of Swi1 (E662K) that is specifically defective in polar fork arrest at a site called RTS1 and causes sensitivity to genotoxic agents, although the DNA binding affinity of Swi1-Swi3 is not affected by this mutation. As expected, the synergistic effect of the Swi1-Swi3 on DNA binding of Mrc1 is also lost by these mutations affecting the interaction between Mrc1 and Swi1-Swi3. Our results reveal an aspect of molecular interactions that may play an important role in replication pausing and fork stabilization.

Annotation

GO molecular function

GO:0000405 - bubble DNA binding

Genes:

GO:0062037 - D-loop DNA binding

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GO:0003690 - double-stranded DNA binding

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GO:0000403 - Y-form DNA binding

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Single locus phenotype

FYPO:0006555 - abnormal multiple protein binding to DNA

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Genotypes:

FYPO:0000659 - abolished DNA binding

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FYPO:0000705 - abolished protein-protein interaction

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Genotypes:

FYPO:0001645 - decreased protein-protein interaction

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FYPO:0000655 - normal DNA binding

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FYPO:0000963 - normal growth on hydroxyurea

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Genotypes:

FYPO:0000085 - sensitive to camptothecin

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Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

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Genotypes: