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Reference - PMID:21642955 - Tra1 has specific regulatory roles, rather than global functions, within the SAGA co-activator complex.

Reference summary

PubMed ID
PMID:21642955
Title
Tra1 has specific regulatory roles, rather than global functions, within the SAGA co-activator complex.
Authors
Helmlinger D, Marguerat S, Villén J, Swaney DL, Gygi SP, Bähler J, Winston F
Citation
EMBO J 2011 Jun 03;30(14):2843-52
Publication year
2011
Abstract
The SAGA complex is a conserved, multifunctional co-activator that has broad roles in eukaryotic transcription. Previous studies suggested that Tra1, the largest SAGA component, is required either for SAGA assembly or for SAGA recruitment by DNA-bound transcriptional activators. In contrast to Saccharomyces cerevisiae and mouse, a tra1Δ mutant is viable in Schizosaccharomyces pombe, allowing us to test these issues in vivo. We find that, in a tra1Δ mutant, SAGA assembles and is recruited to some, but not all, promoters. Consistent with these findings, Tra1 regulates the expression of only a subset of SAGA-dependent genes. We previously reported that the SAGA subunits Gcn5 and Spt8 have opposing regulatory roles during S. pombe sexual differentiation. We show here that, like Gcn5, Tra1 represses this pathway, although by a distinct mechanism. Thus, our study reveals that Tra1 has specific regulatory roles, rather than global functions, within SAGA.

Annotation

Comment

PBO:0000206 - deletion mutant expression profiling

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GO biological process

GO:0000122 - negative regulation of transcription by RNA polymerase II

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GO:0006357 - regulation of transcription by RNA polymerase II

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Single locus phenotype

FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0002061 - inviable vegetative cell population

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FYPO:0001216 - normal SAGA complex assembly

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FYPO:0000097 - sensitive to caffeine during vegetative growth

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FYPO:0000099 - sensitive to canavanine

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0001214 - sensitive to potassium chloride

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FYPO:0001207 - sensitive to raffinose

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FYPO:0000111 - sensitive to rapamycin

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FYPO:0002060 - viable vegetative cell population

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Warnings

PBO:0011492 - tagging Tra1 at its C-terminus is as detrimental as deletion

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