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Reference - PMID:21725325 - Coordination of DNA replication and histone modification by the Rik1-Dos2 complex.

Reference summary

PubMed ID
PMID:21725325
Title
Coordination of DNA replication and histone modification by the Rik1-Dos2 complex.
Authors
Li F, Martienssen R, Cande WZ
Citation
Nature 2011 Jul 03;475(7355):244-8
Publication year
2011
Abstract
Histone modification marks have an important role in many chromatin processes. During DNA replication, both heterochromatin and euchromatin are disrupted ahead of the replication fork and are then reassembled into their original epigenetic states behind the fork. How histone marks are accurately inherited from generation to generation is still poorly understood. In fission yeast (Schizosaccharomyces pombe), RNA interference (RNAi)-mediated histone methylation is cell cycle regulated. Centromeric repeats are transiently transcribed in the S phase of the cell cycle and are processed into short interfering RNAs (siRNAs) by the complexes RITS (RNA-induced initiation of transcriptional gene silencing) and RDRC (RNA-directed RNA polymerase complex). The small RNAs together with silencing factors-including Dos1 (also known as Clr8 and Raf1), Dos2 (also known as Clr7 and Raf2), Rik1 and Lid2-promote heterochromatic methylation of histone H3 at lysine 9 (H3K9) by a histone methyltransferase, Clr4 (refs 8-13). The methylation of H3K9 provides a binding site for Swi6, a structural and functional homologue of metazoan heterochromatin protein 1 (HP1). Here we characterize a silencing complex in fission yeast that contains Dos2, Rik1, Mms19 and Cdc20 (the catalytic subunit of DNA polymerase-ε). This complex regulates RNA polymerase II (RNA Pol II) activity in heterochromatin and is required for DNA replication and heterochromatin assembly. Our findings provide a molecular link between DNA replication and histone methylation, shedding light on how epigenetic marks are transmitted during each cell cycle.

Annotation

GO biological process

GO:0006325 - chromatin organization

Genes:

GO:0031048 - regulatory ncRNA-mediated heterochromatin formation

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GO cellular component

GO:0005634 - nucleus

Genes:

GO:0005721 - pericentric heterochromatin

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Single locus phenotype

FYPO:0001343 - abnormal mitotic DNA replication

Genes:

Genotypes:

FYPO:0000452 - abnormal protein localization to chromatin during vegetative growth

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Genotypes:

FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

Genes:

Genotypes:

FYPO:0000082 - decreased cell population growth at high temperature

Genes:

Genotypes:

FYPO:0001407 - decreased cell population growth on glucose carbon source

Genes:

Genotypes:

FYPO:0004201 - decreased centromeric outer repeat transcript-derived siRNA level

Genes:

Genotypes:

FYPO:0002834 - decreased chromatin silencing at centromere

Genes:

Genotypes:

FYPO:0003096 - decreased histone H3-K9 methylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0002909 - decreased protein localization to chromatin during vegetative growth

Genes:

Genotypes:

FYPO:0001645 - decreased protein-protein interaction

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Genotypes:

FYPO:0000040 - growth auxotrophic for methionine

Genes:

Genotypes:

FYPO:0004982 - increased centromeric transcript level

Genes:

Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

Genes:

Genotypes: