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Reference - PMID:21727087 - A genome wide study in fission yeast reveals nine PPR proteins that regulate mitochondrial gene expression.

Reference summary

PubMed ID
PMID:21727087
Title
A genome wide study in fission yeast reveals nine PPR proteins that regulate mitochondrial gene expression.
Authors
Kühl I, Dujeancourt L, Gaisne M, Herbert CJ, Bonnefoy N
Citation
Nucleic Acids Res 2011 Oct;39(18):8029-41
Publication year
2011
Abstract
Pentatricopeptide repeat (PPR) proteins are particularly numerous in plant mitochondria and chloroplasts, where they are involved in different steps of RNA metabolism, probably due to the repeated 35 amino acid PPR motifs that are thought to mediate interactions with RNA. In non-photosynthetic eukaryotes only a handful of PPR proteins exist, for example the human LRPPRC, which is involved in a mitochondrial disease. We have conducted a systematic study of the PPR proteins in the fission yeast Schizosaccharomyces pombe and identified, in addition to the mitochondrial RNA polymerase, eight proteins all of which localized to the mitochondria, and showed some association with the membrane. The absence of all but one of these PPR proteins leads to a respiratory deficiency and modified patterns of steady state mt-mRNAs or newly synthesized mitochondrial proteins. Some cause a general defect, whereas others affect specific mitochondrial RNAs, either coding or non-coding: cox1, cox2, cox3, 15S rRNA, atp9 or atp6, sometimes leading to secondary defects. Interestingly, the two possible homologs of LRPPRC, ppr4 and ppr5, play opposite roles in the expression of the cox1 mt-mRNA, ppr4 being the first mRNA-specific translational activator identified in S. pombe, whereas ppr5 appears to be a general negative regulator of mitochondrial translation.

Annotation

GO biological process

GO:0140053 - mitochondrial gene expression

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GO cellular component

GO:0005739 - mitochondrion

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Protein features

PBO:0111828 - PPR repeats

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Single locus phenotype

FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0000251 - decreased cell population growth on galactose carbon source

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FYPO:0000442 - decreased cell population growth on glycerol/ethanol carbon source

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FYPO:0000835 - decreased protein level

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FYPO:0000826 - decreased RNA level

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FYPO:0000840 - normal RNA level

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FYPO:0000441 - resistance to antimycin A

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FYPO:0000440 - sensitive to antimycin A

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