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Reference - PMID:21844224 - Spt6 is required for heterochromatic silencing in the fission yeast Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:21844224
Title
Spt6 is required for heterochromatic silencing in the fission yeast Schizosaccharomyces pombe.
Authors
Kiely CM, Marguerat S, Garcia JF, Madhani HD, Bähler J, Winston F
Citation
Mol Cell Biol 2011 Oct;31(20):4193-204
Publication year
2011
Abstract
Spt6 is a conserved factor, critically required for several transcription- and chromatin-related processes. We now show that Spt6 and its binding partner, Iws1, are required for heterochromatic silencing in Schizosaccharomyces pombe. Our studies demonstrate that Spt6 is required for silencing of all heterochromatic loci and that an spt6 mutant has an unusual combination of heterochromatic phenotypes compared to previously studied silencing mutants. Unexpectedly, we find normal nucleosome positioning over heterochromatin and normal levels of histone H3K9 dimethylation at the endogenous pericentric repeats. However, we also find greatly reduced levels of H3K9 trimethylation, elevated levels of H3K14 acetylation, reduced recruitment of several silencing factors, and defects in heterochromatin spreading. Our evidence suggests that Spt6 plays a role at both the transcriptional and posttranscriptional levels; in an spt6 mutant, RNA polymerase II (RNAPII) occupancy at the pericentric regions is only modestly increased, while production of small interfering RNAs (siRNAs) is lost. Taken together, our results suggest that Spt6 is required for multiple steps in heterochromatic silencing by controlling chromatin, transcriptional, and posttranscriptional processes.

Annotation

Comment

PBO:0011110 - Spt6 binding correlates with that of RNAPII at the heterochromatin

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GO cellular component

GO:0005721 - pericentric heterochromatin

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GO molecular function

GO:0005515 - protein binding

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Single locus phenotype

FYPO:0000886 - abnormal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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FYPO:0000864 - abnormal histone H3-K9 trimethylation at centromere during vegetative growth

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FYPO:0000865 - abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth

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FYPO:0000885 - abnormal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth

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FYPO:0000854 - abnormal nucleosome positioning in euchromatin

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FYPO:0000855 - abnormal nucleosome positioning in heterochromatin

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FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0001407 - decreased cell population growth on glucose carbon source

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FYPO:0002834 - decreased chromatin silencing at centromere

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FYPO:0003216 - decreased chromatin silencing at rDNA

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FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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FYPO:0004604 - decreased chromatin silencing at subtelomere

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FYPO:0000450 - decreased protein localization to centromere during vegetative growth

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0000220 - increased centromeric outer repeat transcript level

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FYPO:0000893 - increased histone H3-K9 acetylation at centromere during vegetative growth

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FYPO:0000879 - increased histone H3-K9 trimethylation during vegetative growth

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FYPO:0000786 - increased plasmid loss

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FYPO:0000862 - normal histone H3-K9 dimethylation at centromere during vegetative growth

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FYPO:0000863 - normal histone H3-K9 dimethylation at centromere inner repeat during vegetative growth

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FYPO:0000858 - normal nucleosome positioning in heterochromatin

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FYPO:0000097 - sensitive to caffeine during vegetative growth

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FYPO:0000104 - sensitive to cycloheximide

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FYPO:0000785 - sensitive to formamide

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FYPO:0000091 - sensitive to thiabendazole

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