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Reference - PMID:22017871 - Regulation of the Sre1 hypoxic transcription factor by oxygen-dependent control of DNA binding.

Reference summary

PubMed ID
PMID:22017871
Title
Regulation of the Sre1 hypoxic transcription factor by oxygen-dependent control of DNA binding.
Authors
Lee CY, Yeh TL, Hughes BT, Espenshade PJ
Citation
Mol Cell 2011 Oct 21;44(2):225-34
Publication year
2011
Abstract
Regulation of gene expression plays an integral role in adaptation of cells to hypoxic stress. In mammals, prolyl hydroxylases control levels of the central transcription factor hypoxia inducible factor (HIF) through regulation of HIFα subunit stability. Here, we report that the hydroxylase Ofd1 regulates the Sre1 hypoxic transcription factor in fission yeast by controlling DNA binding. Prolyl hydroxylases require oxygen as a substrate, and the activity of Ofd1 regulates Sre1-dependent transcription. In the presence of oxygen, Ofd1 binds the Sre1 N-terminal transcription factor domain (Sre1N) and inhibits Sre1-dependent transcription by blocking DNA binding. In the absence of oxygen, the inhibitor Nro1 binds Ofd1, thereby releasing Sre1N and leading to activation of genes required for hypoxic growth. In contrast to the HIF system, where proline hydroxylation is essential for regulation, Ofd1 inhibition of Sre1N does not require hydroxylation and, thus, defines a new mechanism for hypoxic gene regulation.

Annotation

GO biological process

GO:0071456 - cellular response to hypoxia

Genes:

GO:2000639 - negative regulation of SREBP signaling pathway

Genes:

GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process

Genes:

GO:2000640 - positive regulation of SREBP signaling pathway

Genes:

GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process

Genes:

GO cellular component

GO:0000785 - chromatin

Genes:

GO molecular function

GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific

Genes:

GO:0005515 - protein binding

Genes:

GO:0140311 - protein sequestering activity

Genes:

GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding

Genes:

Multi-locus phenotype

FYPO:0000825 - increased RNA level during vegetative growth

Genes:

Genotypes:

Single locus phenotype

FYPO:0000658 - decreased DNA binding

Genes:

Genotypes:

FYPO:0000846 - decreased protein degradation during vegetative growth

Genes:

Genotypes:

FYPO:0001274 - decreased protein level during cellular response to hypoxia

Genes:

Genotypes:

FYPO:0000657 - increased DNA binding

Genes:

Genotypes:

FYPO:0000825 - increased RNA level during vegetative growth

Genes:

Genotypes:

FYPO:0002800 - normal protein degradation during vegetative growth

Genes:

Genotypes:

FYPO:0000840 - normal RNA level

Genes:

Genotypes: