PomBase home

Reference - PMID:22139915 - The telomeric transcriptome of Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:22139915
Title
The telomeric transcriptome of Schizosaccharomyces pombe.
Authors
Bah A, Wischnewski H, Shchepachev V, Azzalin CM
Citation
Nucleic Acids Res 2012 Apr;40(7):2995-3005
Publication year
2012
Abstract
Eukaryotic telomeres are transcribed into telomeric repeat-containing RNA (TERRA). Telomeric transcription has been documented in mammals, birds, zebra fish, plants and budding yeast. Here we show that the chromosome ends of Schizosaccharomyces pombe produce distinct RNA species. As with budding yeast and mammals, S. pombe contains G-rich TERRA molecules and subtelomeric RNA species transcribed in the opposite direction of TERRA (ARRET). Moreover, fission yeast chromosome ends produce two novel RNA species: C-rich telomeric repeat-containing transcripts (ARIA) and subtelomeric transcripts complementary to ARRET (αARRET). RNA polymerase II (RNAPII) associates with pombe chromosome ends in vivo and the telomeric factor Rap1 negatively regulates this association, as well as the cellular accumulation of RNA emanating from chromosome ends. We also show that the RNAPII subunit Rpb7 and the non-canonical poly(A) polymerases Cid12 and Cid14 are involved in the regulation of TERRA, ARIA, ARRET and αARRET transcripts. We confirm the evolutionary conservation of telomere transcription, and reveal intriguing similarities and differences in the composition and regulation of telomeric transcripts among model organisms.

Annotation

Single locus phenotype

FYPO:0000657 - increased DNA binding

Genes:

Genotypes:

FYPO:0000825 - increased RNA level during vegetative growth

Genes:

Genotypes:

FYPO:0000780 - increased transcription during vegetative growth

Genes:

Genotypes:

FYPO:0000833 - normal protein level during vegetative growth

Genes:

Genotypes:

FYPO:0001317 - normal RNA level during vegetative growth

Genes:

Genotypes: