PomBase home

Reference - PMID:22226946 - The Ubiquitin ligase Ubr11 is essential for oligopeptide utilization in the fission yeast Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:22226946
Title
The Ubiquitin ligase Ubr11 is essential for oligopeptide utilization in the fission yeast Schizosaccharomyces pombe.
Authors
Kitamura K, Nakase M, Tohda H, Takegawa K
Citation
Eukaryot Cell 2012 Mar;11(3):302-10
Publication year
2012
Abstract
Uptake of extracellular oligopeptides in yeast is mediated mainly by specific transporters of the peptide transporter (PTR) and oligopeptide transporter (OPT) families. Here, we investigated the role of potential peptide transporters in the yeast Schizosaccharomyces pombe. Utilization of naturally occurring dipeptides required only Ptr2/SPBC13A2.04c and none of the other 3 OPT proteins (Isp4, Pgt1, and Opt3), whereas only Isp4 was indispensable for tetrapeptide utilization. Both Ptr2 and Isp4 localized to the cell surface, but under rich nutrient conditions Isp4 localized in the Golgi apparatus through the function of the ubiquitin ligase Pub1. Furthermore, the ubiquitin ligase Ubr11 played a significant role in oligopeptide utilization. The mRNA levels of both the ptr2 and isp4 genes were significantly reduced in ubr11Δ cells, and the dipeptide utilization defect in the ubr11Δ mutant was rescued by the forced expression of Ptr2. Consistent with its role in transcriptional regulation of peptide transporter genes, the Ubr11 protein was accumulated in the nucleus. Unlike the situation in Saccharomyces cerevisiae, the oligopeptide utilization defect in the S. pombe ubr11Δ mutant was not rescued by inactivation of the Tup11/12 transcriptional corepressors, suggesting that the requirement for the Ubr ubiquitin ligase in the upregulation of peptide transporter mRNA levels is conserved in both yeasts; however, the actual mechanism underlying the control appears to be different. We also found that the peptidomimetic proteasome inhibitor MG132 was still operative in a strain lacking all known PTR and OPT peptide transporters. Therefore, irrespective of its peptide-like structure, MG132 is carried into cells independently of the representative peptide transporters.

Annotation

GO biological process

GO:0140206 - dipeptide import across plasma membrane

Genes:

GO:0006357 - regulation of transcription by RNA polymerase II

Genes:

GO:1901583 - tetrapeptide import across plasma membrane

Genes:

GO cellular component

GO:0032153 - cell division site

Genes:

GO:0005794 - Golgi apparatus

Genes:

GO:0005634 - nucleus

Genes:

GO:0005886 - plasma membrane

Genes:

GO:0031520 - plasma membrane of cell tip

Genes:

GO molecular function

GO:0071916 - dipeptide transmembrane transporter activity

Genes:

GO:1901584 - tetrapeptide transmembrane transporter activity

Genes:

Single locus phenotype

FYPO:0001576 - abolished cell population growth on dipeptide nitrogen source

Genes:

Genotypes:

FYPO:0001577 - abolished cell population growth on tetrapeptide nitrogen source

Genes:

Genotypes:

FYPO:0000826 - decreased RNA level

Genes:

Genotypes:

FYPO:0000781 - decreased transcription during vegetative growth

Genes:

Genotypes:

FYPO:0001578 - normal growth on dipeptide nitrogen source

Genes:

Genotypes:

FYPO:0001580 - normal growth on leucine nitrogen source

Genes:

Genotypes:

FYPO:0001579 - normal growth on tetrapeptide nitrogen source

Genes:

Genotypes: