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Reference - PMID:22431512 - RNAi keeps Atf1-bound stress response genes in check at nuclear pores.

Reference summary

PubMed ID
PMID:22431512
Title
RNAi keeps Atf1-bound stress response genes in check at nuclear pores.
Authors
Woolcock KJ, Stunnenberg R, Gaidatzis D, Hotz HR, Emmerth S, Barraud P, Bühler M
Citation
Genes Dev 2012 Apr 01;26(7):683-92
Publication year
2012
Abstract
RNAi pathways are prevalent throughout the eukaryotic kingdom and are well known to regulate gene expression on a post-transcriptional level in the cytoplasm. Less is known about possible functions of RNAi in the nucleus. In the fission yeast Schizosaccharomyces pombe, RNAi is crucial to establish and maintain centromeric heterochromatin and functions to repress genome activity by a chromatin silencing mechanism referred to as cotranscriptional gene silencing (CTGS). Mechanistic details and the physiological relevance of CTGS are unknown. Here we show that RNAi components interact with chromatin at nuclear pores to keep stress response genes in check. We demonstrate that RNAi-mediated CTGS represses stress-inducible genes by degrading mRNAs under noninduced conditions. Under chronic heat stress conditions, a Dicer thermoswitch deports Dicer to the cytoplasm, thereby disrupting CTGS and enabling expression of genes implicated in the acquisition of thermotolerance. Taken together, our work highlights a role for nuclear pores and the stress response transcription factor Atf1 in coordinating the interplay between the RNAi machinery and the S. pombe genome and uncovers a novel mode of RNAi regulation in response to an environmental cue.

Annotation

GO biological process

GO:0033562 - co-transcriptional gene silencing by RNA interference machinery

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GO cellular component

GO:0005829 - cytosol

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GO:0000791 - euchromatin

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GO:0034399 - nuclear periphery

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GO molecular function

GO:1990188 - euchromatin binding

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Single locus phenotype

FYPO:0002664 - increased level of stress responsive gene mRNA during vegetative growth

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