PomBase home

Reference - PMID:22658721 - Atl1 regulates choice between global genome and transcription-coupled repair of O(6)-alkylguanines.

Reference summary

PubMed ID
PMID:22658721
Title
Atl1 regulates choice between global genome and transcription-coupled repair of O(6)-alkylguanines.
Authors
Latypov VF, Tubbs JL, Watson AJ, Marriott AS, McGown G, Thorncroft M, Wilkinson OJ, Senthong P, Butt A, Arvai AS, Millington CL, Povey AC, Williams DM, Santibanez-Koref MF, Tainer JA, Margison GP
Citation
Mol Cell 2012 Jul 13;47(1):50-60
Publication year
2012
Abstract
Nucleotide excision repair (NER) has long been known to remove DNA lesions induced by chemical carcinogens, and the molecular mechanism has been partially elucidated. Here we demonstrate that in Schizosaccharomyces pombe a DNA recognition protein, alkyltransferase-like 1 (Atl1), can play a pivotal role in selecting a specific NER pathway, depending on the nature of the DNA modification. The relative ease of dissociation of Atl1 from DNA containing small O(6)-alkylguanines allows accurate completion of global genome repair (GGR), whereas strong Atl1 binding to bulky O(6)-alkylguanines blocks GGR, stalls the transcription machinery, and diverts the damage to transcription-coupled repair. Our findings redraw the initial stages of the NER process in those organisms that express an alkyltransferase-like gene and raise the question of whether or not O(6)-alkylguanine lesions that are poor substrates for the alkyltransferase proteins in higher eukaryotes might, by analogy, signal such lesions for repair by NER.

Annotation

GO biological process

GO:0070911 - global genome nucleotide-excision repair

Genes:

GO:0006283 - transcription-coupled nucleotide-excision repair

Genes:

GO molecular function

GO:0032132 - O6-alkylguanine-DNA binding

Genes:

Multi-locus phenotype

FYPO:0007149 - normal growth on N-methyl-N'-nitro-N-nitrosoguanidine

Genes:

Genotypes:

FYPO:0001813 - sensitive to N-methyl-N'-nitro-N-nitrosoguanidine

Genes:

Genotypes:

Single locus phenotype

FYPO:0004371 - decreased duration of S-phase DNA damage checkpoint

Genes:

Genotypes:

FYPO:0007149 - normal growth on N-methyl-N'-nitro-N-nitrosoguanidine

Genes:

Genotypes:

FYPO:0001813 - sensitive to N-methyl-N'-nitro-N-nitrosoguanidine

Genes:

Genotypes: