PomBase home

Reference - PMID:22683269 - HP1(Swi6) mediates the recognition and destruction of heterochromatic RNA transcripts.

Reference summary

PubMed ID
PMID:22683269
Title
HP1(Swi6) mediates the recognition and destruction of heterochromatic RNA transcripts.
Authors
Keller C, Adaixo R, Stunnenberg R, Woolcock KJ, Hiller S, Bühler M
Citation
Mol Cell 2012 Jul 27;47(2):215-27
Publication year
2012
Abstract
HP1 proteins are major components of heterochromatin, which is generally perceived to be an inert and transcriptionally inactive chromatin structure. Yet, HP1 binding to chromatin is highly dynamic and robust silencing of heterochromatic genes can involve RNA processing. Here, we demonstrate by a combination of in vivo and in vitro experiments that the fission yeast HP1(Swi6) protein guarantees tight repression of heterochromatic genes through RNA sequestration and degradation. Stimulated by positively charged residues in the hinge region, RNA competes with methylated histone H3K9 for binding to the chromodomain of HP1(Swi6). Hence, HP1(Swi6) binding to RNA is incompatible with stable heterochromatin association. We propose a model in which an ensemble of HP1(Swi6) proteins functions as a heterochromatin-specific checkpoint, capturing and priming heterochromatic RNAs for the RNA degradation machinery. Sustaining a functional checkpoint requires continuous exchange of HP1(Swi6) within heterochromatin, which explains the dynamic localization of HP1 proteins on heterochromatin.

Annotation

Comment

PBO:0013441 - heterochromatic mRNAs transcribed in cid14delta are not translated

Genes:

GO molecular function

GO:0062072 - histone H3K9me2/3 reader activity

Genes:

GO:0003723 - RNA binding

Genes:

Multi-locus phenotype

FYPO:0002355 - decreased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth

Genes:

Genotypes:

FYPO:0002354 - increased level of heterochromatin-encoded proteins

Genes:

Genotypes:

FYPO:0002359 - normal histone H3-K9 dimethylation at telomere during vegetative growth

Genes:

Genotypes:

Single locus phenotype

FYPO:0002133 - abolished protein-RNA interaction

Genes:

Genotypes:

FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

Genes:

Genotypes:

FYPO:0002355 - decreased histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth

Genes:

Genotypes:

FYPO:0002134 - decreased protein-RNA interaction

Genes:

Genotypes:

FYPO:0002354 - increased level of heterochromatin-encoded proteins

Genes:

Genotypes:

FYPO:0002360 - normal chromatin silencing at centromere

Genes:

Genotypes:

FYPO:0000964 - normal growth on thiabendazole

Genes:

Genotypes:

FYPO:0002358 - normal histone H3-K9 dimethylation at silent mating-type cassette during vegetative growth

Genes:

Genotypes:

FYPO:0002359 - normal histone H3-K9 dimethylation at telomere during vegetative growth

Genes:

Genotypes:

FYPO:0002356 - normal methylated histone residue binding

Genes:

Genotypes:

FYPO:0002357 - normal protein-RNA interaction

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes: