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Reference - PMID:22900017 - The fission yeast GATA factor, Gaf1, modulates sexual development via direct down-regulation of ste11+ expression in response to nitrogen starvation.

Reference summary

PubMed ID
PMID:22900017
Title
The fission yeast GATA factor, Gaf1, modulates sexual development via direct down-regulation of ste11+ expression in response to nitrogen starvation.
Authors
Kim L, Hoe KL, Yu YM, Yeon JH, Maeng PJ
Citation
PLoS One 2012;7(8):e42409
Publication year
2012
Abstract
Gaf1 is the first GATA family zinc-finger transcription factor identified in Schizosaccharomyces pombe. Here, we report that Gaf1 functions as a negatively acting transcription factor of ste11(+), delaying the entrance of cells exposed to transient nitrogen starvation into the meiotic cycle. gaf1Δ strains exhibited accelerated G(1)-arrest upon nitrogen starvation. Moreover, gaf1Δ mutation caused increased mating and sporulation frequency under both nitrogen-starved and unstarved conditions, while overexpression of gaf1(+) led to a significant impairment of sporulation. By microarray analysis, we found that approximately 63% (116 genes) of the 183 genes up-regulated in unstarved gaf1Δ cells were nitrogen starvation-responsive genes, and furthermore that 25 genes among the genes up-regulated by gaf1Δ mutation are Ste11 targets (e.g., gpa1(+), ste4(+), spk1(+), ste11(+), and mei2(+)). The phenotype caused by gaf1Δ mutation was masked by ste11Δ mutation, indicating that ste11(+) is epistatic to gaf1(+) with respect to sporulation efficiency, and accordingly that gaf1(+) functions upstream of ste11(+) in the signaling pathway governing sexual development. gaf1Δ strains showed accelerated ste11(+) expression under nitrogen starvation and increased ste11(+) expression even under normal conditions. Electrophoretic mobility shift assay analysis demonstrated that Gaf1 specifically binds to the canonical GATA motif (5'-HGATAR-3') spanning from -371 to -366 in ste11(+) promoter. Consequently, Gaf1 provides the prime example for negative regulation of ste11(+) transcription through direct binding to a cis-acting motif of its promoter.

Annotation

GO biological process

GO:0031138 - negative regulation of conjugation with cellular fusion

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GO molecular function

GO:0000987 - cis-regulatory region sequence-specific DNA binding

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GO:0001227 - DNA-binding transcription repressor activity, RNA polymerase II-specific

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Qualitative gene expression

PomGeneEx:0000011 - RNA level increased

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Single locus phenotype

FYPO:0000583 - abolished sporulation

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FYPO:0000709 - decreased cell population growth during nitrogen starvation

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FYPO:0002172 - increased level of nitrogen starvation gene mRNA during vegetative growth

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FYPO:0006154 - increased level of pheromone response gene mRNA during vegetative growth

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FYPO:0001043 - increased mating efficiency

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FYPO:0001219 - increased protein level during cellular response to nitrogen starvation

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FYPO:0001327 - increased protein level during vegetative growth

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FYPO:0002020 - increased RNA level during nitrogen starvation

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FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0001357 - normal vegetative cell population growth

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FYPO:0001112 - premature cell cycle arrest in mitotic G1 phase in response to nitrogen starvation

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