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Reference - PMID:22927644 - Replication fork collapse and genome instability in a deoxycytidylate deaminase mutant.

Reference summary

PubMed ID
PMID:22927644
Title
Replication fork collapse and genome instability in a deoxycytidylate deaminase mutant.
Authors
Sánchez A, Sharma S, Rozenzhak S, Roguev A, Krogan NJ, Chabes A, Russell P
Citation
Mol Cell Biol 2012 Nov;32(21):4445-54
Publication year
2012
Abstract
Ribonucleotide reductase (RNR) and deoxycytidylate deaminase (dCMP deaminase) are pivotal allosteric enzymes required to maintain adequate pools of deoxyribonucleoside triphosphates (dNTPs) for DNA synthesis and repair. Whereas RNR inhibition slows DNA replication and activates checkpoint responses, the effect of dCMP deaminase deficiency is largely unknown. Here, we report that deleting the Schizosaccharomyces pombe dcd1(+) dCMP deaminase gene (SPBC2G2.13c) increases dCTP ∼30-fold and decreases dTTP ∼4-fold. In contrast to the robust growth of a Saccharomyces cerevisiae dcd1Δ mutant, fission yeast dcd1Δ cells delay cell cycle progression in early S phase and are sensitive to multiple DNA-damaging agents, indicating impaired DNA replication and repair. DNA content profiling of dcd1Δ cells differs from an RNR-deficient mutant. Dcd1 deficiency activates genome integrity checkpoints enforced by Rad3 (ATR), Cds1 (Chk2), and Chk1 and creates critical requirements for proteins involved in recovery from replication fork collapse, including the γH2AX-binding protein Brc1 and Mus81 Holliday junction resolvase. These effects correlate with increased nuclear foci of the single-stranded DNA binding protein RPA and the homologous recombination repair protein Rad52. Moreover, Brc1 suppresses spontaneous mutagenesis in dcd1Δ cells. We propose that replication forks stall and collapse in dcd1Δ cells, burdening DNA damage and checkpoint responses to maintain genome integrity.

Annotation

Single locus phenotype

FYPO:0001407 - decreased cell population growth on glucose carbon source

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FYPO:0002571 - decreased cellular dGTP level

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FYPO:0002572 - decreased cellular dTTP level

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FYPO:0000453 - DNA content decreased during vegetative growth

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FYPO:0002570 - increased cellular dATP level

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FYPO:0002569 - increased cellular dCTP level

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FYPO:0001974 - increased number of cells with 1C DNA content

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FYPO:0000972 - increased number of Rad52 foci during vegetative growth

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FYPO:0002573 - increased number of Ssb1 foci

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FYPO:0001038 - increased protein phosphorylation during vegetative growth

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FYPO:0000256 - mutator

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0001098 - sensitive to 4-nitroquinoline N-oxide

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FYPO:0000095 - sensitive to bleomycin

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FYPO:0000085 - sensitive to camptothecin

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0000268 - sensitive to UV during vegetative growth

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