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Reference - PMID:23223230 - Zinc-dependent regulation of the Adh1 antisense transcript in fission yeast.

Reference summary

PubMed ID
PMID:23223230
Title
Zinc-dependent regulation of the Adh1 antisense transcript in fission yeast.
Authors
Ehrensberger KM, Mason C, Corkins ME, Anderson C, Dutrow N, Cairns BR, Dalley B, Milash B, Bird AJ
Citation
J Biol Chem 2013 Jan 11;288(2):759-69
Publication year
2013
Abstract
In yeast, Adh1 (alcohol dehydrogenase 1) is an abundant zinc-binding protein that is required for the conversion of acetaldehyde to ethanol. Through transcriptome profiling of the Schizosaccharomyces pombe genome, we identified a natural antisense transcript at the adh1 locus that is induced in response to zinc limitation. This antisense transcript (adh1AS) shows a reciprocal expression pattern to that of the adh1 mRNA partner. In this study, we show that increased expression of the adh1AS transcript in zinc-limited cells is necessary for the repression of adh1 gene expression and that the increased level of the adh1AS transcript in zinc-limited cells is a result of two mechanisms. At the transcriptional level, the adh1AS transcript is expressed at a high level in zinc-limited cells. In addition to this transcriptional control, adh1AS transcripts preferentially accumulate in zinc-limited cells when the adh1AS transcript is expressed from a constitutive promoter. This secondary mechanism requires the simultaneous expression of adh1. Our studies reveal how multiple mechanisms can synergistically control the ratio of sense to antisense transcripts and highlight a novel mechanism by which adh1 gene expression can be controlled by cellular zinc availability.

Annotation

Qualitative gene expression

PomGeneEx:0000012 - RNA level decreased

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PomGeneEx:0000011 - RNA level increased

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Single locus phenotype

FYPO:0001551 - increased protein level during cellular response to zinc ion starvation

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Genotypes:

FYPO:0001547 - increased RNA level during cellular response to zinc ion starvation

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Genotypes:

FYPO:0001889 - RNA absent from cell

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