PomBase home

Reference - PMID:23314747 - Myb-domain protein Teb1 controls histone levels and centromere assembly in fission yeast.

Reference summary

PubMed ID
PMID:23314747
Title
Myb-domain protein Teb1 controls histone levels and centromere assembly in fission yeast.
Authors
Valente LP, Dehé PM, Klutstein M, Aligianni S, Watt S, Bähler J, Cooper JP
Citation
EMBO J 2013 Feb 06;32(3):450-60
Publication year
2013
Abstract
The TTAGGG motif is common to two seemingly unrelated dimensions of chromatin function-the vertebrate telomere repeat and the promoter regions of many Schizosaccharomyces pombe genes, including all of those encoding canonical histones. The essential S. pombe protein Teb1 contains two Myb-like DNA binding domains related to those found in telomere proteins and binds the human telomere repeat sequence TTAGGG. Here, we analyse Teb1 binding throughout the genome and the consequences of reduced Teb1 function. Chromatin immunoprecipitation (ChIP)-on-chip analysis reveals robust Teb1 binding at many promoters, notably including all of those controlling canonical histone gene expression. A hypomorphic allele, teb1-1, confers reduced binding and reduced levels of histone transcripts. Prompted by previously suggested connections between histone expression and centromere identity, we examined localization of the centromeric histone H3 variant Cnp1 and found reduced centromeric binding along with reduced centromeric silencing. These data identify Teb1 as a master regulator of histone levels and centromere identity.

Annotation

GO biological process

GO:0006357 - regulation of transcription by RNA polymerase II

Genes:

GO cellular component

GO:0000785 - chromatin

Genes:

GO:0005634 - nucleus

Genes:

GO molecular function

GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific

Genes:

GO:0000977 - RNA polymerase II transcription regulatory region sequence-specific DNA binding

Genes:

Qualitative gene expression

PomGeneEx:0000018 - protein level increased

Genes:

Single locus phenotype

FYPO:0000640 - abnormal chromatin silencing at centromere central core

Genes:

Genotypes:

FYPO:0004481 - abolished cell population growth at high temperature

Genes:

Genotypes:

FYPO:0001407 - decreased cell population growth on glucose carbon source

Genes:

Genotypes:

FYPO:0004907 - decreased chromatin binding at histone promoter

Genes:

Genotypes:

FYPO:0004906 - decreased level of histone gene mRNA during vegetative growth

Genes:

Genotypes:

FYPO:0004905 - decreased level of iron homeostasis gene mRNA during vegetative growth

Genes:

Genotypes:

FYPO:0004711 - decreased level of translation gene mRNA during vegetative growth

Genes:

Genotypes:

FYPO:0004904 - decreased protein localization to centromere central core during vegetative growth

Genes:

Genotypes:

FYPO:0001117 - decreased RNA level during vegetative growth

Genes:

Genotypes:

FYPO:0002262 - inviable after spore germination, multiple cell divisions, elongated cell

Genes:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

Genes:

Genotypes:

FYPO:0004742 - normal chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0003555 - normal chromatin silencing at subtelomere

Genes:

Genotypes:

FYPO:0001317 - normal RNA level during vegetative growth

Genes:

Genotypes:

FYPO:0002687 - normal telomere length during vegetative growth

Genes:

Genotypes: