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Reference - PMID:23658229 - Red5 and three nuclear pore components are essential for efficient suppression of specific mRNAs during vegetative growth of fission yeast.

Reference summary

PubMed ID
PMID:23658229
Title
Red5 and three nuclear pore components are essential for efficient suppression of specific mRNAs during vegetative growth of fission yeast.
Authors
Sugiyama T, Wanatabe N, Kitahata E, Tani T, Sugioka-Sugiyama R
Citation
Nucleic Acids Res 2013 Jul;41(13):6674-86
Publication year
2013
Abstract
Zinc-finger domains are found in many nucleic acid-binding proteins in both prokaryotes and eukaryotes. Proteins carrying zinc-finger domains have important roles in various nuclear transactions, including transcription, mRNA processing and mRNA export; however, for many individual zinc-finger proteins in eukaryotes, the exact function of the protein is not fully understood. Here, we report that Red5 is involved in efficient suppression of specific mRNAs during vegetative growth of Schizosaccharomyces pombe. Red5, which contains five C3H1-type zinc-finger domains, localizes to the nucleus where it forms discrete dots. A red5 point mutation, red5-2, results in the upregulation of specific meiotic mRNAs in vegetative mutant red5-2 cells; northern blot data indicated that these meiotic mRNAs in red5-2 cells have elongated poly(A) tails. RNA-fluorescence in situ hybridization results demonstrate that poly(A)(+) RNA species accumulate in the nucleolar regions of red5-deficient cells. Moreover, Red5 genetically interacts with several mRNA export factors. Unexpectedly, three components of the nuclear pore complex also suppress a specific set of meiotic mRNAs. These results indicate that Red5 function is important to meiotic mRNA degradation; they also suggest possible connections among selective mRNA decay, mRNA export and the nuclear pore complex in vegetative fission yeast.

Annotation

GO biological process

GO:0033621 - nuclear mRNA surveillance of meiosis-specific transcripts

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GO cellular component

GO:0005634 - nucleus

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Single locus phenotype

FYPO:0000183 - abnormal poly(A)+ mRNA export from nucleus

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FYPO:0001118 - abnormal vegetative cell morphology

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FYPO:0000583 - abolished sporulation

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FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0000080 - decreased cell population growth at low temperature

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FYPO:0001407 - decreased cell population growth on glucose carbon source

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FYPO:0000303 - decreased conjugation frequency

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FYPO:0002174 - decreased degradation of DSR-containing RNA

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FYPO:0000708 - decreased mating efficiency

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FYPO:0001117 - decreased RNA level during vegetative growth

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FYPO:0000584 - decreased sporulation frequency

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FYPO:0000223 - elongated multiseptate vegetative cell

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FYPO:0002173 - increased level of meiotic gene mRNA during vegetative growth

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FYPO:0002172 - increased level of nitrogen starvation gene mRNA during vegetative growth

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FYPO:0000825 - increased RNA level during vegetative growth

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FYPO:0002061 - inviable vegetative cell population

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FYPO:0000674 - normal cell population growth at high temperature

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FYPO:0002141 - normal cell population growth at low temperature

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0000760 - normal mating

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FYPO:0000838 - normal protein localization to nucleus during vegetative growth

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FYPO:0001317 - normal RNA level during vegetative growth

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FYPO:0000095 - sensitive to bleomycin

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0000091 - sensitive to thiabendazole

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FYPO:0000268 - sensitive to UV during vegetative growth

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FYPO:0001234 - slow vegetative cell population growth

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