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Reference - PMID:24021628 - Structure-function analysis of Hmo1 unveils an ancestral organization of HMG-Box factors involved in ribosomal DNA transcription from yeast to human.

Reference summary

PubMed ID
PMID:24021628
Title
Structure-function analysis of Hmo1 unveils an ancestral organization of HMG-Box factors involved in ribosomal DNA transcription from yeast to human.
Authors
Albert B, Colleran C, Léger-Silvestre I, Berger AB, Dez C, Normand C, Perez-Fernandez J, McStay B, Gadal O
Citation
Nucleic Acids Res 2013 Dec;41(22):10135-49
Publication year
2013
Abstract
Ribosome biogenesis is a major metabolic effort for growing cells. In Saccharomyces cerevisiae, Hmo1, an abundant high-mobility group box protein (HMGB) binds to the coding region of the RNA polymerase I transcribed ribosomal RNAs genes and the promoters of ∼70% of ribosomal protein genes. In this study, we have demonstrated the functional conservation of eukaryotic HMGB proteins involved in ribosomal DNA (rDNA) transcription. We have shown that when expressed in budding yeast, human UBF1 and a newly identified Sp-Hmo1 (Schizosaccharomyces pombe) localize to the nucleolus and suppress growth defect of the RNA polymerase I mutant rpa49-Δ. Owing to the multiple functions of both proteins, Hmo1 and UBF1 are not fully interchangeable. By deletion and domains swapping in Hmo1, we identified essential domains that stimulate rDNA transcription but are not fully required for stimulation of ribosomal protein genes expression. Hmo1 is organized in four functional domains: a dimerization module, a canonical HMGB motif followed by a conserved domain and a C-terminal nucleolar localization signal. We propose that Hmo1 has acquired species-specific functions and shares with UBF1 and Sp-Hmo1 an ancestral function to stimulate rDNA transcription.

Annotation

GO biological process

GO:0006360 - transcription by RNA polymerase I

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GO cellular component

GO:0005730 - nucleolus

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Single locus phenotype

FYPO:0003398 - decreased 32S rRNA precursor level

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FYPO:0003397 - decreased 35S rRNA precursor level

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FYPO:0001135 - increased 35S rRNA precursor level

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FYPO:0002061 - inviable vegetative cell population

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FYPO:0003400 - normal 20S rRNA precursor level

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FYPO:0003399 - normal 27S rRNA precursor level

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Orthologs