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Reference - PMID:2406130 - A mutation in a single gene of Schizosaccharomyces pombe affects the expression of several snRNAs and causes defects in RNA processing.

Reference summary

PubMed ID
PMID:2406130
Title
A mutation in a single gene of Schizosaccharomyces pombe affects the expression of several snRNAs and causes defects in RNA processing.
Authors
Potashkin J, Frendewey D
Citation
EMBO J 1990 Feb;9(2):525-34
Publication year
1990
Abstract
A bank of temperature sensitive (ts-) mutants of Schizosaccharomyces pombe was screened for snRNA expression mutants using an oligodeoxynucleotide that recognizes U2 RNA. One mutant with a novel phenotype was identified that has reduced steady-state levels of the spliceosomal snRNAs U1, U2, U4, U5 and U6. In addition, the mutant exhibits a temperature-dependent accumulation of aberrant U2 and U4 transcripts elongated at their 3' end. The steady-state concentration of the RNA component of RNase P is also reduced in the mutant, whereas the amount of U3 RNA, 7SL RNA, tRNA, rRNA and mRNA are the same as wild-type. Pre-mRNA, pre-tRNA and U6 RNA precursor processing are impaired in the mutant. Genetic analysis demonstrates that the snRNA defects are tightly linked to the ts- growth defect and are recessive. We have named this mutant snm1 to indicate a defect in snRNA maintenance. The data on snm1 suggest that a single trans-acting factor is essential for the maintenance of steady-state levels of several snRNAs and for proper 3' end formation of U2 and U4 RNAs.

Annotation

GO biological process

GO:0034474 - U2 snRNA 3'-end processing

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GO:0034475 - U4 snRNA 3'-end processing

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Single locus phenotype

FYPO:0003029 - decreased mRNA splicing, via spliceosome

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FYPO:0001117 - decreased RNA level during vegetative growth

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FYPO:0003041 - decreased snRNA splicing

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FYPO:0001555 - formation of abnormal tRNA processing intermediates

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FYPO:0001317 - normal RNA level during vegetative growth

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FYPO:0002060 - viable vegetative cell population

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