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Reference - PMID:24192486 - The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast.

Reference summary

PubMed ID
PMID:24192486
Title
The conserved Fanconi anemia nuclease Fan1 and the SUMO E3 ligase Pli1 act in two novel Pso2-independent pathways of DNA interstrand crosslink repair in yeast.
Authors
Fontebasso Y, Etheridge TJ, Oliver AW, Murray JM, Carr AM
Citation
DNA Repair (Amst) 2013 Dec;12(12):1011-23
Publication year
2013
Abstract
DNA interstrand cross-links (ICLs) represent a physical barrier to the progression of cellular machinery involved in DNA metabolism. Thus, this type of adduct represents a serious threat to genomic stability and as such, several DNA repair pathways have evolved in both higher and lower eukaryotes to identify this type of damage and restore the integrity of the genetic material. Human cells possess a specialized ICL-repair system, the Fanconi anemia (FA) pathway. Conversely yeasts rely on the concerted action of several DNA repair systems. Recent work in higher eukaryotes identified and characterized a novel conserved FA component, FAN1 (Fanconi anemia-associated nuclease 1, or FANCD2/FANCI-associated nuclease 1). In this study, we characterize Fan1 in the yeast Schizosaccharomyces pombe. Using standard genetics, we demonstrate that Fan1 is a key component of a previously unidentified ICL-resolution pathway. Using high-throughput synthetic genetic arrays, we also demonstrate the existence of a third pathway of ICL repair, dependent on the SUMO E3 ligase Pli1. Finally, using sequence-threaded homology models, we predict and validate key residues essential for Fan1 activity in ICL repair.

Annotation

GO biological process

GO:0036297 - interstrand cross-link repair

Genes:

GO:0036299 - non-recombinational interstrand cross-link repair

Genes:

GO:1901255 - nucleotide-excision repair involved in interstrand cross-link repair

Genes:

GO:0036298 - recombinational interstrand cross-link repair

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Multi-locus phenotype

FYPO:0002061 - inviable vegetative cell population

Genes:

Genotypes:

FYPO:0000969 - normal growth during cellular response to UV

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Genotypes:

FYPO:0000102 - sensitive to cisplatin

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FYPO:0006347 - sensitive to mechlorethamine

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Genotypes:

FYPO:0000970 - sensitive to mitomycin C

Genes:

Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

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Single locus phenotype

FYPO:0000969 - normal growth during cellular response to UV

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Genotypes:

FYPO:0001690 - normal growth on camptothecin

Genes:

Genotypes:

FYPO:0000963 - normal growth on hydroxyurea

Genes:

Genotypes:

FYPO:0006348 - normal growth on mechlorethamine

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Genotypes:

FYPO:0000957 - normal growth on methyl methanesulfonate

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Genotypes:

FYPO:0005032 - normal mutation rate

Genes:

Genotypes:

FYPO:0000102 - sensitive to cisplatin

Genes:

Genotypes:

FYPO:0006347 - sensitive to mechlorethamine

Genes:

Genotypes:

FYPO:0000970 - sensitive to mitomycin C

Genes:

Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

Genes:

Genotypes: