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Reference - PMID:24240238 - Elimination of shelterin components bypasses RNAi for pericentric heterochromatin assembly.

Reference summary

PubMed ID
PMID:24240238
Title
Elimination of shelterin components bypasses RNAi for pericentric heterochromatin assembly.
Authors
Tadeo X, Wang J, Kallgren SP, Liu J, Reddy BD, Qiao F, Jia S
Citation
Genes Dev 2013 Nov 15;27(22):2489-99
Publication year
2013
Abstract
The RNAi pathway is required for heterochromatin assembly at repetitive DNA elements in diverse organisms. In fission yeast, loss of RNAi causes pericentric heterochromatin defects, compromising gene silencing and chromosome segregation. Here we show that deletion of telomere shelterin components restores pericentric heterochromatin and its functions in RNAi mutants. We further isolated a separation-of-function mutant of Poz1 and revealed that defective telomere silencing, but not telomere length control, is critical for bypassing RNAi. Further analyses demonstrated that compromising shelterin-mediated heterochromatin assembly in RNAi mutants releases heterochromatin protein Swi6, which is redistributed to pericentric regions through RNAi-independent heterochromatin assembly pathways. Given the high mobility of Swi6 protein and that increased levels of Swi6 facilitates heterochromatin spreading as well as ectopic heterochromatin assembly, our results suggest that constitutive heterochromatin domains use multiple pathways to form high-affinity platforms to restrain Swi6, thus limiting its availability and avoiding promiscuous heterochromatin formation.

Annotation

GO biological process

GO:0031509 - subtelomeric heterochromatin formation

Genes:

Multi-locus phenotype

FYPO:0004746 - abolished heterochromatin assembly involved in chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0004745 - abolished histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0004136 - abolished histone H3-K9 dimethylation at telomere during vegetative growth

Genes:

Genotypes:

FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

Genes:

Genotypes:

FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0000220 - increased centromeric outer repeat transcript level

Genes:

Genotypes:

FYPO:0004573 - increased telomeric transcript level

Genes:

Genotypes:

FYPO:0004742 - normal chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0000964 - normal growth on thiabendazole

Genes:

Genotypes:

FYPO:0004744 - normal heterochromatin maintenance involved in chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0004743 - normal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

Genes:

Genotypes:

FYPO:0003576 - normal protein localization to subtelomeric heterochromatin

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes:

Single locus phenotype

FYPO:0004136 - abolished histone H3-K9 dimethylation at telomere during vegetative growth

Genes:

Genotypes:

FYPO:0002835 - centromeric outer repeat transcript-derived siRNA absent

Genes:

Genotypes:

FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0004604 - decreased chromatin silencing at subtelomere

Genes:

Genotypes:

FYPO:0000888 - decreased histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0002386 - decreased protein localization to pericentric heterochromatin at centromere outer repeat region

Genes:

Genotypes:

FYPO:0002387 - decreased protein localization to subtelomeric heterochromatin during vegetative growth

Genes:

Genotypes:

FYPO:0002019 - elongated telomeres during vegetative growth

Genes:

Genotypes:

FYPO:0000220 - increased centromeric outer repeat transcript level

Genes:

Genotypes:

FYPO:0003010 - increased protein localization to subtelomeric heterochromatin during vegetative growth

Genes:

Genotypes:

FYPO:0004573 - increased telomeric transcript level

Genes:

Genotypes:

FYPO:0002567 - normal centromeric outer repeat transcript level

Genes:

Genotypes:

FYPO:0004742 - normal chromatin silencing at centromere outer repeat

Genes:

Genotypes:

FYPO:0003555 - normal chromatin silencing at subtelomere

Genes:

Genotypes:

FYPO:0000964 - normal growth on thiabendazole

Genes:

Genotypes:

FYPO:0004743 - normal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

Genes:

Genotypes:

FYPO:0003576 - normal protein localization to subtelomeric heterochromatin

Genes:

Genotypes:

FYPO:0002687 - normal telomere length during vegetative growth

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes: