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Reference - PMID:24652833 - Spd2 assists Spd1 in the modulation of ribonucleotide reductase architecture but does not regulate deoxynucleotide pools.

Reference summary

PubMed ID
PMID:24652833
Title
Spd2 assists Spd1 in the modulation of ribonucleotide reductase architecture but does not regulate deoxynucleotide pools.
Authors
Vejrup-Hansen R, Fleck O, Landvad K, Fahnøe U, Broendum SS, Schreurs AS, Kragelund BB, Carr AM, Holmberg C, Nielsen O
Citation
J Cell Sci 2014 Jun 01;127(Pt 11):2460-70
Publication year
2014
Abstract
In yeasts, small intrinsically disordered proteins (IDPs) modulate ribonucleotide reductase (RNR) activity to ensure an optimal supply of dNTPs for DNA synthesis. The Schizosaccharomyces pombe Spd1 protein can directly inhibit the large RNR subunit (R1), import the small subunit (R2) into the nucleus and induce an architectural change in the R1-R2 holocomplex. Here, we report the characterization of Spd2, a protein with sequence similarity to Spd1. We show that Spd2 is a CRL4(Cdt2)-controlled IDP that functions together with Spd1 in the DNA damage response and in modulation of RNR architecture. However, Spd2 does not regulate dNTP pools and R2 nuclear import. Furthermore, deletion of spd2 only weakly suppresses the Rad3(ATR) checkpoint dependency of CRL4(Cdt2) mutants. However, when we raised intracellular dNTP pools by inactivation of RNR feedback inhibition, deletion of spd2 could suppress the checkpoint dependency of CRL4(Cdt2) mutant cells to the same extent as deletion of spd1. Collectively, these observations suggest that Spd1 on its own regulates dNTP pools, whereas in combination with Spd2 it modulates RNR architecture and sensitizes cells to DNA damage.

Annotation

GO biological process

GO:0009262 - deoxyribonucleotide metabolic process

Genes:

GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process

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GO cellular component

GO:0005634 - nucleus

Genes:

GO:0005971 - ribonucleoside-diphosphate reductase complex

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GO molecular function

GO:0005515 - protein binding

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Multi-locus phenotype

FYPO:0003066 - abnormal sporulation resulting in formation of ascus with fewer than four spores

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Genotypes:

FYPO:0004481 - abolished cell population growth at high temperature

Genes:

Genotypes:

FYPO:0002779 - abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during vegetative growth

Genes:

Genotypes:

FYPO:0005752 - increased cellular dNTP level

Genes:

Genotypes:

FYPO:0001164 - normal growth on glucose carbon source

Genes:

Genotypes:

FYPO:0000963 - normal growth on hydroxyurea

Genes:

Genotypes:

FYPO:0000957 - normal growth on methyl methanesulfonate

Genes:

Genotypes:

FYPO:0005751 - normal growth on Zeocin

Genes:

Genotypes:

FYPO:0000590 - normal sporulation

Genes:

Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

Genes:

Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

Genes:

Genotypes:

FYPO:0005750 - sensitive to Zeocin

Genes:

Genotypes:

FYPO:0001492 - viable elongated vegetative cell

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Genotypes:

Qualitative gene expression

PomGeneEx:0000023 - protein level constant

Genes:

PomGeneEx:0000019 - protein level decreased

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PomGeneEx:0000021 - protein present

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Single locus phenotype

FYPO:0000704 - abnormal protein-protein interaction

Genes:

Genotypes:

FYPO:0003066 - abnormal sporulation resulting in formation of ascus with fewer than four spores

Genes:

Genotypes:

FYPO:0002779 - abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during vegetative growth

Genes:

Genotypes:

FYPO:0000080 - decreased cell population growth at low temperature

Genes:

Genotypes:

FYPO:0005752 - increased cellular dNTP level

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Genotypes:

FYPO:0000614 - increased duration of mitotic S phase

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Genotypes:

FYPO:0004189 - increased protein level during cellular response to hydroxyurea

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Genotypes:

FYPO:0001327 - increased protein level during vegetative growth

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Genotypes:

FYPO:0000825 - increased RNA level during vegetative growth

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Genotypes:

FYPO:0005753 - normal cellular dNTP level

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Genotypes:

FYPO:0001164 - normal growth on glucose carbon source

Genes:

Genotypes:

FYPO:0000963 - normal growth on hydroxyurea

Genes:

Genotypes:

FYPO:0000957 - normal growth on methyl methanesulfonate

Genes:

Genotypes:

FYPO:0005751 - normal growth on Zeocin

Genes:

Genotypes:

FYPO:0000838 - normal protein localization to nucleus during vegetative growth

Genes:

Genotypes:

FYPO:0001420 - normal vegetative cell population growth rate

Genes:

Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

Genes:

Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

Genes:

Genotypes:

FYPO:0005750 - sensitive to Zeocin

Genes:

Genotypes:

FYPO:0001492 - viable elongated vegetative cell

Genes:

Genotypes:

FYPO:0002177 - viable vegetative cell with normal cell morphology

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Genotypes: