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Reference - PMID:24911838 - Functional conservation of coenzyme Q biosynthetic genes among yeasts, plants, and humans.

Reference summary

PubMed ID
PMID:24911838
Title
Functional conservation of coenzyme Q biosynthetic genes among yeasts, plants, and humans.
Authors
Hayashi K, Ogiyama Y, Yokomi K, Nakagawa T, Kaino T, Kawamukai M
Citation
PLoS One 2014;9(6):e99038
Publication year
2014
Abstract
Coenzyme Q (CoQ) is an essential factor for aerobic growth and oxidative phosphorylation in the electron transport system. The biosynthetic pathway for CoQ has been proposed mainly from biochemical and genetic analyses of Escherichia coli and Saccharomyces cerevisiae; however, the biosynthetic pathway in higher eukaryotes has been explored in only a limited number of studies. We previously reported the roles of several genes involved in CoQ synthesis in the fission yeast Schizosaccharomyces pombe. Here, we expand these findings by identifying ten genes (dps1, dlp1, ppt1, and coq3-9) that are required for CoQ synthesis. CoQ10-deficient S. pombe coq deletion strains were generated and characterized. All mutant fission yeast strains were sensitive to oxidative stress, produced a large amount of sulfide, required an antioxidant to grow on minimal medium, and did not survive at the stationary phase. To compare the biosynthetic pathway of CoQ in fission yeast with that in higher eukaryotes, the ability of CoQ biosynthetic genes from humans and plants (Arabidopsis thaliana) to functionally complement the S. pombe coq deletion strains was determined. With the exception of COQ9, expression of all other human and plant COQ genes recovered CoQ10 production by the fission yeast coq deletion strains, although the addition of a mitochondrial targeting sequence was required for human COQ3 and COQ7, as well as A. thaliana COQ6. In summary, this study describes the functional conservation of CoQ biosynthetic genes between yeasts, humans, and plants.

Annotation

Complementation

PBO:0036533 - functionally complemented by A. thaliana COQ3

Genes:

PBO:0036248 - functionally complemented by A. thaliana COQ4

Genes:

PBO:0036506 - functionally complemented by A. thaliana COQ5

Genes:

PBO:0036401 - functionally complemented by A. thaliana COQ6 with an S. pombe MTS

Genes:

PBO:0036456 - functionally complemented by A. thaliana COQ8

Genes:

PBO:0036255 - functionally complemented by human COQ2

Genes:

PBO:0036532 - functionally complemented by human COQ3 with an S. pombe MTS

Genes:

PBO:0036247 - functionally complemented by human COQ4

Genes:

PBO:0036505 - functionally complemented by human COQ5

Genes:

PBO:0036400 - functionally complemented by human COQ6

Genes:

PBO:0036405 - functionally complemented by human COQ7 with an S. pombe MTS

Genes:

PBO:0036455 - functionally complemented by human COQ8

Genes:

PBO:0036335 - functionally complemented by human DLP1 AND DPS1

Genes:

PBO:0123313 - is not functionally complemented by A. thaliana COQ6

Genes:

PBO:0123300 - is not functionally complemented by A. thaliana COQ9

Genes:

PBO:0123298 - is not functionally complemented by human COQ9

Genes:

PBO:0123299 - is not functionally complemented by human COQ9 with an S. pombe MTS

Genes:

PBO:0123301 - is not functionally complemented by human DLP1

Genes:

GO biological process

GO:0008299 - isoprenoid biosynthetic process

Genes:

GO:0006744 - ubiquinone biosynthetic process

Genes:

GO cellular component

GO:0005743 - mitochondrial inner membrane

Genes:

GO:0005739 - mitochondrion

Genes:

Multi-locus phenotype

FYPO:0001712 - coenzyme Q10 absent from cell

Genes:

Genotypes:

FYPO:0000246 - growth auxotrophic for antioxidant

Genes:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

Genes:

Genotypes:

FYPO:0000103 - sensitive to copper

Genes:

Genotypes:

FYPO:0002060 - viable vegetative cell population

Genes:

Genotypes:

Single locus phenotype

FYPO:0003690 - abolished cell population growth on glycerol/ethanol carbon source

Genes:

Genotypes:

FYPO:0001712 - coenzyme Q10 absent from cell

Genes:

Genotypes:

FYPO:0000246 - growth auxotrophic for antioxidant

Genes:

Genotypes:

FYPO:0003691 - increased cellular 5-demethoxyubiquinone-10 level

Genes:

Genotypes:

FYPO:0001413 - increased cellular sulfide level

Genes:

Genotypes:

FYPO:0002061 - inviable vegetative cell population

Genes:

Genotypes:

FYPO:0000245 - loss of viability in stationary phase

Genes:

Genotypes:

FYPO:0000103 - sensitive to copper

Genes:

Genotypes:

FYPO:0000087 - sensitive to hydrogen peroxide

Genes:

Genotypes:

FYPO:0002060 - viable vegetative cell population

Genes:

Genotypes: