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Reference - PMID:25102102 - A metabolic strategy to enhance long-term survival by Phx1 through stationary phase-specific pyruvate decarboxylases in fission yeast.

Reference summary

PubMed ID
PMID:25102102
Title
A metabolic strategy to enhance long-term survival by Phx1 through stationary phase-specific pyruvate decarboxylases in fission yeast.
Authors
Kim JY, Kim EJ, Lopez-Maury L, Bähler J, Roe JH
Citation
Aging (Albany NY) 2014 Jul;6(7):587-601
Publication year
2014
Abstract
In the fission yeast Schizosaccharomyces pombe, the stationary phase-specific transcription factor Phx1 contributes to long-term survival, stress tolerance, and meiosis. We identified Phx1-dependent genes through transcriptome analysis, and further analyzed those related with carbohydrate and thiamine metabolism, whose expression decreased in ∆phx1. Consistent with mRNA changes, the level of thiamine pyrophosphate (TPP) and TPP-utilizing pyruvate decarboxylase activity that converts pyruvate to acetaldehyde were also reduced in the mutant. Therefore, Phx1 appears to shift metabolic flux by diverting pyruvate from the TCA cycle and respiration to ethanol fermentation. Among the four predicted genes for pyruvate decarboxylase, only the Phx1-dependent genes (pdc201+ and pdc202+) contributed to long-term survival as judged by mutation and overexpression studies. These findings indicate that the Phx1-mediated long-term survival is achieved primarily through increasing the synthesis and activity of pyruvate decarboxylase. Consistent with this hypothesis, we observed that Phx1 curtailed respiration when cells entered stationary phase. Introduction of Δphx1 mutation compromised the long-lived phenotypes of Δpka1 and Δsck2 mutants that are devoid of pro-aging kinases of nutrient-signalling pathways, and of the Δpyp1 mutant with constitutively activated stress-responsive kinase Sty1. Therefore, achievement of long-term viability through both nutrient limitation and anti-stress response appears to be dependent on Phx1.

Annotation

GO biological process

GO:2001172 - positive regulation of glycolytic fermentation to ethanol

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GO molecular function

GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific

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Multi-locus phenotype

FYPO:0000245 - loss of viability in stationary phase

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Qualitative gene expression

PomGeneEx:0000012 - RNA level decreased

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PomGeneEx:0000011 - RNA level increased

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PomGeneEx:0000013 - RNA level unchanged

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PomGeneEx:0000014 - RNA present

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Single locus phenotype

FYPO:0004363 - altered level of stress responsive gene mRNA during vegetative growth

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FYPO:0004900 - decreased cellular thiamine level during stationary phase

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FYPO:0004897 - decreased level of nitrogen starvation gene mRNA during vegetative growth

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FYPO:0004899 - decreased pyruvate decarboxylase activity during stationary phase

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FYPO:0001244 - decreased RNA level during cellular response to thiamine starvation

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FYPO:0004169 - decreased RNA level in stationary phase

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FYPO:0004164 - increased cellular reactive oxygen species level in stationary phase

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FYPO:0004896 - increased level of generation of precursor metabolites and energy gene mRNA during vegetative growth

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FYPO:0002173 - increased level of meiotic gene mRNA during vegetative growth

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FYPO:0004901 - increased oxygen consumption during stationary phase

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FYPO:0003862 - increased protein oxidation in stationary phase

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FYPO:0001309 - increased viability in stationary phase

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FYPO:0000245 - loss of viability in stationary phase

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FYPO:0001420 - normal vegetative cell population growth rate

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FYPO:0001310 - normal viability in stationary phase

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