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Reference - PMID:25254656 - The Vip1 inositol polyphosphate kinase family regulates polarized growth and modulates the microtubule cytoskeleton in fungi.

Reference summary

PubMed ID
PMID:25254656
Title
The Vip1 inositol polyphosphate kinase family regulates polarized growth and modulates the microtubule cytoskeleton in fungi.
Authors
Pöhlmann J, Risse C, Seidel C, Pohlmann T, Jakopec V, Walla E, Ramrath P, Takeshita N, Baumann S, Feldbrügge M, Fischer R, Fleig U
Citation
PLoS Genet 2014 Sep;10(9):e1004586
Publication year
2014
Abstract
Microtubules (MTs) are pivotal for numerous eukaryotic processes ranging from cellular morphogenesis, chromosome segregation to intracellular transport. Execution of these tasks requires intricate regulation of MT dynamics. Here, we identify a new regulator of the Schizosaccharomyces pombe MT cytoskeleton: Asp1, a member of the highly conserved Vip1 inositol polyphosphate kinase family. Inositol pyrophosphates generated by Asp1 modulate MT dynamic parameters independent of the central +TIP EB1 and in a dose-dependent and cellular-context-dependent manner. Importantly, our analysis of the in vitro kinase activities of various S. pombe Asp1 variants demonstrated that the C-terminal phosphatase-like domain of the dual domain Vip1 protein negatively affects the inositol pyrophosphate output of the N-terminal kinase domain. These data suggest that the former domain has phosphatase activity. Remarkably, Vip1 regulation of the MT cytoskeleton is a conserved feature, as Vip1-like proteins of the filamentous ascomycete Aspergillus nidulans and the distantly related pathogenic basidiomycete Ustilago maydis also affect the MT cytoskeleton in these organisms. Consistent with the role of interphase MTs in growth zone selection/maintenance, all 3 fungal systems show aspects of aberrant cell morphogenesis. Thus, for the first time we have identified a conserved biological process for inositol pyrophosphates.

Annotation

GO biological process

GO:0032958 - inositol phosphate biosynthetic process

Genes:

GO:0071545 - inositol phosphate catabolic process

Genes:

GO:0043647 - inositol phosphate metabolic process

Genes:

GO:0051516 - regulation of bipolar cell growth

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GO:0070507 - regulation of microtubule cytoskeleton organization

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GO molecular function

GO:0000828 - inositol hexakisphosphate kinase activity

Genes:

GO:0052843 - inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity

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Multi-locus phenotype

FYPO:0006893 - decreased inositol hexakisphosphate kinase activity

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Genotypes:

FYPO:0000091 - sensitive to thiabendazole

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Genotypes:

FYPO:0006103 - short interphase microtubules

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Single locus phenotype

FYPO:0006892 - abolished inositol hexakisphosphate kinase activity

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Genotypes:

FYPO:0005485 - abolished inositol phosphate phosphatase activity

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Genotypes:

FYPO:0005682 - decreased microtubule depolymerization during vegetative growth

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Genotypes:

FYPO:0005799 - decreased microtubule dwell time at cell tip

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Genotypes:

FYPO:0003417 - increased microtubule dwell time at cell tip

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Genotypes:

FYPO:0003328 - misoriented interphase microtubules

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Genotypes:

FYPO:0004025 - resistance to carbendazim

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Genotypes:

FYPO:0000069 - resistance to thiabendazole

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Genotypes:

FYPO:0003840 - sensitive to carbendazim

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes:

FYPO:0006103 - short interphase microtubules

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Genotypes:

FYPO:0005567 - T-shaped cell during G0 to G1 transition

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Genotypes:

FYPO:0002060 - viable vegetative cell population

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Genotypes: