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Reference - PMID:25373780 - A genomic Multiprocess survey of machineries that control and link cell shape, microtubule organization, and cell-cycle progression.

Reference summary

PubMed ID
PMID:25373780
Title
A genomic Multiprocess survey of machineries that control and link cell shape, microtubule organization, and cell-cycle progression.
Authors
Graml V, Studera X, Lawson JLD, Chessel A, Geymonat M, Bortfeld-Miller M, Walter T, Wagstaff L, Piddini E, Carazo Salas RE
Citation
Dev Cell 2014 Oct 27;31(2):227-239
Publication year
2014
Abstract
Understanding cells as integrated systems requires that we systematically decipher how single genes affect multiple biological processes and how processes are functionally linked. Here, we used multiprocess phenotypic profiling, combining high-resolution 3D confocal microscopy and multiparametric image analysis, to simultaneously survey the fission yeast genome with respect to three key cellular processes: cell shape, microtubule organization, and cell-cycle progression. We identify, validate, and functionally annotate 262 genes controlling specific aspects of those processes. Of these, 62% had not been linked to these processes before and 35% are implicated in multiple processes. Importantly, we identify a conserved role for DNA-damage responses in controlling microtubule stability. In addition, we investigate how the processes are functionally linked. We show unexpectedly that disruption of cell-cycle progression does not necessarily affect cell size control and that distinct aspects of cell shape regulate microtubules and vice versa, identifying important systems-level links across these processes.

Annotation

Single locus phenotype

FYPO:0003625 - abnormal microtubule cytoskeleton morphology during mitotic interphase

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FYPO:0002736 - abnormal mitotic cell cycle phase

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FYPO:0000233 - long cytoplasmic microtubules

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FYPO:0002401 - microtubule bundles present in increased numbers

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FYPO:0003595 - S-shaped cell

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FYPO:0002760 - short cytoplasmic microtubules

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FYPO:0002112 - viable curved vegetative cell

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FYPO:0001492 - viable elongated vegetative cell

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FYPO:0002903 - viable pear-shaped vegetative cell

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FYPO:0002380 - viable spheroid vegetative cell

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FYPO:0002106 - viable stubby vegetative cell

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FYPO:0002197 - viable vegetative cell with abnormal cell shape

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