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Reference - PMID:25580577 - Tetrameric Ctp1 coordinates DNA binding and DNA bridging in DNA double-strand-break repair.

Reference summary

PubMed ID
PMID:25580577
Title
Tetrameric Ctp1 coordinates DNA binding and DNA bridging in DNA double-strand-break repair.
Authors
Andres SN, Appel CD, Westmoreland JW, Williams JS, Nguyen Y, Robertson PD, Resnick MA, Williams RS
Citation
Nat Struct Mol Biol 2015 Feb;22(2):158-66
Publication year
2015
Abstract
Ctp1 (also known as CtIP or Sae2) collaborates with Mre11-Rad50-Nbs1 to initiate repair of DNA double-strand breaks (DSBs), but its functions remain enigmatic. We report that tetrameric Schizosaccharomyces pombe Ctp1 contains multivalent DNA-binding and DNA-bridging activities. Through structural and biophysical analyses of the Ctp1 tetramer, we define the salient features of Ctp1 architecture: an N-terminal interlocking tetrameric helical dimer-of-dimers (THDD) domain and a central intrinsically disordered region (IDR) linked to C-terminal 'RHR' DNA-interaction motifs. The THDD, IDR and RHR are required for Ctp1 DNA-bridging activity in vitro, and both the THDD and RHR are required for efficient DSB repair in S. pombe. Our results establish non-nucleolytic roles of Ctp1 in binding and coordination of DSB-repair intermediates and suggest that ablation of human CtIP DNA binding by truncating mutations underlie the CtIP-linked Seckel and Jawad syndromes.

Annotation

Comment

PBO:0091947 - Ctp1 is intrinsically disordered except at the N-terminus

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GO molecular function

GO:0000405 - bubble DNA binding

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GO:0000406 - double-strand/single-strand DNA junction binding

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GO:0003690 - double-stranded DNA binding

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GO:0070336 - flap-structured DNA binding

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GO:0003697 - single-stranded DNA binding

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GO:0000403 - Y-form DNA binding

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Multi-locus phenotype

FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0004229 - normal growth during cellular response to ionizing radiation

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FYPO:0003183 - normal growth on phleomycin

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FYPO:0001357 - normal vegetative cell population growth

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FYPO:0000267 - sensitive to ionizing radiation during vegetative growth

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FYPO:0002344 - sensitive to phleomycin

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Single locus phenotype

FYPO:0005220 - abnormal protein oligomerization

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FYPO:0000659 - abolished DNA binding

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FYPO:0000658 - decreased DNA binding

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FYPO:0003660 - decreased double-strand break repair during vegetative growth

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0000972 - increased number of Rad52 foci during vegetative growth

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FYPO:0000655 - normal DNA binding

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FYPO:0004229 - normal growth during cellular response to ionizing radiation

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FYPO:0000969 - normal growth during cellular response to UV

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FYPO:0001690 - normal growth on camptothecin

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FYPO:0003183 - normal growth on phleomycin

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FYPO:0005221 - normal protein oligomerization

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FYPO:0001357 - normal vegetative cell population growth

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FYPO:0000085 - sensitive to camptothecin

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FYPO:0000267 - sensitive to ionizing radiation during vegetative growth

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FYPO:0002344 - sensitive to phleomycin

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FYPO:0000268 - sensitive to UV during vegetative growth

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FYPO:0001492 - viable elongated vegetative cell

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Subunit composition

PBO:0015242 - homomeric(4)

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