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Reference - PMID:25664722 - A global profile of replicative polymerase usage.

Reference summary

PubMed ID
PMID:25664722
Title
A global profile of replicative polymerase usage.
Authors
Daigaku Y, Keszthelyi A, Müller CA, Miyabe I, Brooks T, Retkute R, Hubank M, Nieduszynski CA, Carr AM
Citation
Nat Struct Mol Biol 2015 Mar;22(3):192-198
Publication year
2015
Abstract
Three eukaryotic DNA polymerases are essential for genome replication. Polymerase (Pol) α-primase initiates each synthesis event and is rapidly replaced by processive DNA polymerases: Polɛ replicates the leading strand, whereas Polδ performs lagging-strand synthesis. However, it is not known whether this division of labor is maintained across the whole genome or how uniform it is within single replicons. Using Schizosaccharomyces pombe, we have developed a polymerase usage sequencing (Pu-seq) strategy to map polymerase usage genome wide. Pu-seq provides direct replication-origin location and efficiency data and indirect estimates of replication timing. We confirm that the division of labor is broadly maintained across an entire genome. However, our data suggest a subtle variability in the usage of the two polymerases within individual replicons. We propose that this results from occasional leading-strand initiation by Polδ followed by exchange for Polɛ.

Annotation

GO biological process

GO:1903459 - mitotic DNA replication lagging strand elongation

Genes:

GO:1903460 - mitotic DNA replication leading strand elongation

Genes:

GO molecular function

GO:0003887 - DNA-directed DNA polymerase activity

Genes:

Multi-locus phenotype

FYPO:0005031 - increased ribonucleotide incorporation on lagging strand

Genes:

Genotypes:

FYPO:0005030 - increased ribonucleotide incorporation on leading strand

Genes:

Genotypes:

FYPO:0001234 - slow vegetative cell population growth

Genes:

Genotypes: