PomBase home

Reference - PMID:25806539 - A cascade of iron-containing proteins governs the genetic iron starvation response to promote iron uptake and inhibit iron storage in fission yeast.

Reference summary

PubMed ID
PMID:25806539
Title
A cascade of iron-containing proteins governs the genetic iron starvation response to promote iron uptake and inhibit iron storage in fission yeast.
Authors
Encinar del Dedo J, Gabrielli N, Carmona M, Ayté J, Hidalgo E
Citation
PLoS Genet 2015 Mar;11(3):e1005106
Publication year
2015
Abstract
Iron is an essential cofactor, but it is also toxic at high levels. In Schizosaccharomyces pombe, the sensor glutaredoxin Grx4 guides the activity of the repressors Php4 and Fep1 to mediate a complex transcriptional response to iron deprivation: activation of Php4 and inactivation of Fep1 leads to inhibition of iron usage/storage, and to promotion of iron import, respectively. However, the molecular events ruling the activity of this double-branched pathway remained elusive. We show here that Grx4 incorporates a glutathione-containing iron-sulfur cluster, alone or forming a heterodimer with the BolA-like protein Fra2. Our genetic study demonstrates that Grx4-Fra2, but not Fep1 nor Php4, participates not only in iron starvation signaling but also in iron-related aerobic metabolism. Iron-containing Grx4 binds and inactivates the Php4 repressor; upon iron deprivation, the cluster in Grx4 is probably disassembled, the proteins dissociate, and Php4 accumulates at the nucleus and represses iron consumption genes. Fep1 is also an iron-containing protein, and the tightly bound iron is required for transcriptional repression. Our data suggest that the cluster-containing Grx4-Fra2 heterodimer constitutively binds to Fep1, and upon iron deprivation the disassembly of the iron cluster between Grx4 and Fra2 promotes reverse metal transfer from Fep1 to Grx4-Fra2, and de-repression of iron-import genes. Our genetic and biochemical study demonstrates that the glutaredoxin Grx4 independently governs the Php4 and Fep1 repressors through metal transfer. Whereas iron loss from Grx4 seems to be sufficient to release Php4 and allow its nuclear accumulation, total or partial disassembly of the Grx4-Fra2 cluster actively participates in iron-containing Fep1 activation by sequestering its iron and decreasing its interaction with promoters.

Annotation

GO biological process

GO:0006879 - intracellular iron ion homeostasis

Genes:

GO cellular component

GO:0005829 - cytosol

Genes:

GO:0005634 - nucleus

Genes:

GO molecular function

GO:0051537 - 2 iron, 2 sulfur cluster binding

Genes:

GO:0001227 - DNA-binding transcription repressor activity, RNA polymerase II-specific

Genes:

GO:0005506 - iron ion binding

Genes:

GO:0140482 - iron sensor activity

Genes:

GO:0005515 - protein binding

Genes:

GO:0140311 - protein sequestering activity

Genes:

Modification

MOD:00738 - iron containing modified residue

Genes:

MOD:00739 - iron-sulfur cluster containing modification

Genes:

Qualitative gene expression

PomGeneEx:0000011 - RNA level increased

Genes:

Single locus phenotype

FYPO:0005656 - abolished iron ion binding

Genes:

Genotypes:

FYPO:0001407 - decreased cell population growth on glucose carbon source

Genes:

Genotypes:

FYPO:0005487 - decreased iron-sulfur cluster binding

Genes:

Genotypes:

FYPO:0005654 - decreased level of iron assimilation gene mRNA during vegetative growth

Genes:

Genotypes:

FYPO:0001117 - decreased RNA level during vegetative growth

Genes:

Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

Genes:

Genotypes:

FYPO:0005420 - increased level of iron assimilation gene mRNA during vegetative growth

Genes:

Genotypes:

FYPO:0005653 - increased level of iron ion starvation-induced proteins during glutathione starvation

Genes:

Genotypes:

FYPO:0002014 - increased RNA level during cellular response to iron ion starvation

Genes:

Genotypes:

FYPO:0001814 - normal cell population growth during iron starvation

Genes:

Genotypes:

FYPO:0001164 - normal growth on glucose carbon source

Genes:

Genotypes:

FYPO:0005655 - normal level of iron assimilation gene mRNA during vegetative growth

Genes:

Genotypes:

FYPO:0002015 - sensitive to iron ion starvation

Genes:

Genotypes:

FYPO:0002016 - sensitive to oxygen

Genes:

Genotypes: