PomBase home

Reference - PMID:26446992 - Chromatin association of the SMC5/6 complex is dependent on binding of its NSE3 subunit to DNA.

Reference summary

PubMed ID
PMID:26446992
Title
Chromatin association of the SMC5/6 complex is dependent on binding of its NSE3 subunit to DNA.
Authors
Zabrady K, Adamus M, Vondrova L, Liao C, Skoupilova H, Novakova M, Jurcisinova L, Alt A, Oliver AW, Lehmann AR, Palecek JJ
Citation
Nucleic Acids Res 2016 Feb 18;44(3):1064-79
Publication year
2016
Abstract
SMC5/6 is a highly conserved protein complex related to cohesin and condensin, which are the key components of higher-order chromatin structures. The SMC5/6 complex is essential for proliferation in yeast and is involved in replication fork stability and processing. However, the precise mechanism of action of SMC5/6 is not known. Here we present evidence that the NSE1/NSE3/NSE4 sub-complex of SMC5/6 binds to double-stranded DNA without any preference for DNA-replication/recombination intermediates. Mutations of key basic residues within the NSE1/NSE3/NSE4 DNA-binding surface reduce binding to DNA in vitro. Their introduction into the Schizosaccharomyces pombe genome results in cell death or hypersensitivity to DNA damaging agents. Chromatin immunoprecipitation analysis of the hypomorphic nse3 DNA-binding mutant shows a reduced association of fission yeast SMC5/6 with chromatin. Based on our results, we propose a model for loading of the SMC5/6 complex onto the chromatin.

Annotation

GO cellular component

GO:0061638 - CENP-A containing chromatin

Genes:

GO:0099115 - chromosome, subtelomeric region

Genes:

GO:0005634 - nucleus

Genes:

GO:0005721 - pericentric heterochromatin

Genes:

GO:0033553 - rDNA heterochromatin

Genes:

GO molecular function

GO:0003690 - double-stranded DNA binding

Genes:

Multi-locus phenotype

FYPO:0002059 - inviable cell population

Genes:

Genotypes:

Single locus phenotype

FYPO:0000141 - abnormal mitotic sister chromatid segregation

Genes:

Genotypes:

FYPO:0003165 - cut with abnormal chromosome segregation

Genes:

Genotypes:

FYPO:0005018 - decreased double-stranded DNA binding

Genes:

Genotypes:

FYPO:0002385 - decreased protein localization to heterochromatin during vegetative growth

Genes:

Genotypes:

FYPO:0001919 - fragmented nucleus during vegetative growth

Genes:

Genotypes:

FYPO:0002059 - inviable cell population

Genes:

Genotypes:

FYPO:0000085 - sensitive to camptothecin

Genes:

Genotypes:

FYPO:0000102 - sensitive to cisplatin

Genes:

Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

Genes:

Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

Genes:

Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

Genes:

Genotypes: