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Reference - PMID:26537787 - Targeting of SUMO substrates to a Cdc48-Ufd1-Npl4 segregase and STUbL pathway in fission yeast.

Reference summary

PubMed ID
PMID:26537787
Title
Targeting of SUMO substrates to a Cdc48-Ufd1-Npl4 segregase and STUbL pathway in fission yeast.
Authors
Køhler JB, Tammsalu T, Jørgensen MM, Steen N, Hay RT, Thon G
Citation
Nat Commun 2015 Nov 05;6:8827
Publication year
2015
Abstract
In eukaryotes, the conjugation of proteins to the small ubiquitin-like modifier (SUMO) regulates numerous cellular functions. A proportion of SUMO conjugates are targeted for degradation by SUMO-targeted ubiquitin ligases (STUbLs) and it has been proposed that the ubiquitin-selective chaperone Cdc48/p97-Ufd1-Npl4 facilitates this process. However, the extent to which the two pathways overlap, and how substrates are selected, remains unknown. Here we address these questions in fission yeast through proteome-wide analyses of SUMO modification sites. We identify over a thousand sumoylated lysines in a total of 468 proteins and quantify changes occurring in the SUMO modification status when the STUbL or Ufd1 pathways are compromised by mutations. The data suggest the coordinated processing of several classes of SUMO conjugates, many dynamically associated with centromeres or telomeres. They provide new insights into subnuclear organization and chromosome biology, and, altogether, constitute an extensive resource for the molecular characterization of SUMO function and dynamics.

Annotation

Modification

MOD:01149 - sumoylated lysine

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Single locus phenotype

FYPO:0002775 - decreased level of sumoylated protein in cell

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0005619 - increased level of sumoylated protein in cell

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FYPO:0002776 - normal level of sumoylated protein in cell

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FYPO:0006887 - normal protein sumoylation during vegetative growth

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FYPO:0001357 - normal vegetative cell population growth

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FYPO:0002177 - viable vegetative cell with normal cell morphology

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