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Reference - PMID:26582768 - Abo1, a conserved bromodomain AAA-ATPase, maintains global nucleosome occupancy and organisation.

Reference summary

PubMed ID
PMID:26582768
Title
Abo1, a conserved bromodomain AAA-ATPase, maintains global nucleosome occupancy and organisation.
Authors
Gal C, Murton HE, Subramanian L, Whale AJ, Moore KM, Paszkiewicz K, Codlin S, Bähler J, Creamer KM, Partridge JF, Allshire RC, Kent NA, Whitehall SK
Citation
EMBO Rep 2016 Jan;17(1):79-93
Publication year
2016
Abstract
Maintenance of the correct level and organisation of nucleosomes is crucial for genome function. Here, we uncover a role for a conserved bromodomain AAA-ATPase, Abo1, in the maintenance of nucleosome architecture in fission yeast. Cells lacking abo1(+) experience both a reduction and mis-positioning of nucleosomes at transcribed sequences in addition to increased intragenic transcription, phenotypes that are hallmarks of defective chromatin re-establishment behind RNA polymerase II. Abo1 is recruited to gene sequences and associates with histone H3 and the histone chaperone FACT. Furthermore, the distribution of Abo1 on chromatin is disturbed by impaired FACT function. The role of Abo1 extends to some promoters and also to silent heterochromatin. Abo1 is recruited to pericentromeric heterochromatin independently of the HP1 ortholog, Swi6, where it enforces proper nucleosome occupancy. Consequently, loss of Abo1 alleviates silencing and causes elevated chromosome mis-segregation. We suggest that Abo1 provides a histone chaperone function that maintains nucleosome architecture genome-wide.

Annotation

GO biological process

GO:0140673 - transcription elongation-coupled chromatin remodeling

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GO cellular component

GO:0000785 - chromatin

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Multi-locus phenotype

FYPO:0004481 - abolished cell population growth at high temperature

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FYPO:0001407 - decreased cell population growth on glucose carbon source

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FYPO:0002059 - inviable cell population

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FYPO:0000089 - sensitive to methyl methanesulfonate

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Single locus phenotype

FYPO:0000853 - abnormal nucleosome positioning

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FYPO:0003066 - abnormal sporulation resulting in formation of ascus with fewer than four spores

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FYPO:0004170 - abolished histone H3-K9 dimethylation at centromere during vegetative growth

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FYPO:0003411 - decreased chromatin silencing at centromere inner repeat

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FYPO:0003412 - decreased chromatin silencing at centromere outer repeat

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FYPO:0002827 - decreased chromatin silencing at silent mating-type cassette

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FYPO:0005218 - decreased level of histone H2A in cell

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FYPO:0003249 - decreased level of histone H3 at dh repeat

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FYPO:0004578 - decreased level of histone H3 in cell

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FYPO:0000581 - decreased spore germination frequency

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FYPO:0005219 - decreased transcript length

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FYPO:0003557 - increased antisense RNA level

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FYPO:0000220 - increased centromeric outer repeat transcript level

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FYPO:0002664 - increased level of stress responsive gene mRNA during vegetative growth

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FYPO:0004342 - increased LTR-derived RNA level

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FYPO:0001840 - increased minichromosome loss during vegetative growth

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FYPO:0005917 - increased subtelomeric heterochromatin RNA level

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FYPO:0000862 - normal histone H3-K9 dimethylation at centromere during vegetative growth

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FYPO:0000760 - normal mating

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FYPO:0001839 - normal minichromosome loss

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FYPO:0004993 - normal spore germination frequency

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0000091 - sensitive to thiabendazole

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FYPO:0001234 - slow vegetative cell population growth

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FYPO:0001492 - viable elongated vegetative cell

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