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Reference - PMID:26804377 - The architecture of the Schizosaccharomyces pombe CCR4-NOT complex.

Reference summary

PubMed ID
PMID:26804377
Title
The architecture of the Schizosaccharomyces pombe CCR4-NOT complex.
Authors
Ukleja M, Cuellar J, Siwaszek A, Kasprzak JM, Czarnocki-Cieciura M, Bujnicki JM, Dziembowski A, Valpuesta JM
Citation
Nat Commun 2016 Jan 25;7:10433
Publication year
2016
Abstract
CCR4-NOT is a large protein complex present both in cytoplasm and the nucleus of eukaryotic cells. Although it is involved in a variety of distinct processes related to expression of genetic information such as poly(A) tail shortening, transcription regulation, nuclear export and protein degradation, there is only fragmentary information available on some of its nine subunits. Here we show a comprehensive structural characterization of the native CCR4-NOT complex from Schizosaccharomyces pombe. Our cryo-EM 3D reconstruction of the complex, combined with techniques such as immunomicroscopy, RNA-nanogold labelling, docking of the available high-resolution structures and models of different subunits and domains, allow us to propose its full molecular architecture. We locate all functionally defined domains endowed with deadenylating and ubiquitinating activities, the nucleus-specific RNA-interacting subunit Mmi1, as well as surfaces responsible for protein-protein interactions. This information provides insight into cooperation of the different CCR4-NOT complex functions.

Annotation

GO biological process

GO:0000289 - nuclear-transcribed mRNA poly(A) tail shortening

Genes:

GO cellular component

GO:0030015 - CCR4-NOT core complex

Genes:

GO molecular function

GO:0005515 - protein binding

Genes: