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Reference - PMID:27035982 - Functional architecture of the Reb1-Ter complex of Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:27035982
Title
Functional architecture of the Reb1-Ter complex of Schizosaccharomyces pombe.
Authors
Jaiswal R, Choudhury M, Zaman S, Singh S, Santosh V, Bastia D, Escalante CR
Citation
Proc Natl Acad Sci U S A 2016 Apr 19;113(16):E2267-76
Publication year
2016
Abstract
Reb1 ofSchizosaccharomyces pomberepresents a family of multifunctional proteins that bind to specific terminator sites (Ter) and cause polar termination of transcription catalyzed by RNA polymerase I (pol I) and arrest of replication forks approaching the Ter sites from the opposite direction. However, it remains to be investigated whether the same mechanism causes arrest of both DNA transactions. Here, we present the structure of Reb1 as a complex with a Ter site at a resolution of 2.7 Å. Structure-guided molecular genetic analyses revealed that it has distinct and well-defined DNA binding and transcription termination (TTD) domains. The region of the protein involved in replication termination is distinct from the TTD. Mechanistically, the data support the conclusion that transcription termination is not caused by just high affinity Reb1-Ter protein-DNA interactions. Rather, protein-protein interactions between the TTD with the Rpa12 subunit of RNA pol I seem to be an integral part of the mechanism. This conclusion is further supported by the observation that double mutations in TTD that abolished its interaction with Rpa12 also greatly reduced transcription termination thereby revealing a conduit for functional communications between RNA pol I and the terminator protein.

Annotation

GO biological process

GO:0006363 - termination of RNA polymerase I transcription

Genes:

GO cellular component

GO:0033553 - rDNA heterochromatin

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GO molecular function

GO:0005515 - protein binding

Genes:

GO:0043110 - rDNA spacer replication fork barrier binding

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Single locus phenotype

FYPO:0005981 - abnormal termination of RNA polymerase I transcription

Genes:

Genotypes:

FYPO:0001645 - decreased protein-protein interaction

Genes:

Genotypes: