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Reference - PMID:27098497 - CRL4(Wdr70) regulates H2B monoubiquitination and facilitates Exo1-dependent resection.

Reference summary

PubMed ID
PMID:27098497
Title
CRL4(Wdr70) regulates H2B monoubiquitination and facilitates Exo1-dependent resection.
Authors
Zeng M, Ren L, Mizuno K, Nestoras K, Wang H, Tang Z, Guo L, Kong D, Hu Q, He Q, Du L, Carr AM, Liu C
Citation
Nat Commun 2016 Apr 21;7:11364
Publication year
2016
Abstract
Double-strand breaks repaired by homologous recombination (HR) are first resected to form single-stranded DNA, which binds replication protein A (RPA). RPA attracts mediators that load the Rad51 filament to promote strand invasion, the defining feature of HR. How the resection machinery navigates nucleosome-packaged DNA is poorly understood. Here we report that in Schizosaccharomyces pombe a conserved DDB1-CUL4-associated factor (DCAF), Wdr70, is recruited to DSBs as part of the Cullin4-DDB1 ubiquitin ligase (CRL4(Wdr70)) and stimulates distal H2B lysine 119 mono-ubiquitination (uH2B). Wdr70 deletion, or uH2B loss, results in increased loading of the checkpoint adaptor and resection inhibitor Crb2(53BP1), decreased Exo1 association and delayed resection. Wdr70 is dispensable for resection upon Crb2(53BP1) loss, or when the Set9 methyltransferase that creates docking sites for Crb2 is deleted. Finally, we establish that this histone regulatory cascade similarly controls DSB resection in human cells.

Annotation

GO biological process

GO:0000724 - double-strand break repair via homologous recombination

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GO cellular component

GO:0080008 - Cul4-RING E3 ubiquitin ligase complex

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GO:0005634 - nucleus

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GO:0035861 - site of double-strand break

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GO molecular function

GO:0140463 - chromatin-protein adaptor activity

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Multi-locus phenotype

FYPO:0002553 - abnormal double-strand break processing

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Genotypes:

FYPO:0003486 - abolished protein localization to double-strand break site

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FYPO:0000705 - abolished protein-protein interaction

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Genotypes:

FYPO:0003912 - decreased double-strand break repair via homologous recombination

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Genotypes:

FYPO:0005608 - decreased histone H2B-K119 ubiquitination at double-strand break site during vegetative growth

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Genotypes:

FYPO:0002474 - decreased protein localization to double-strand break site

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Genotypes:

FYPO:0005609 - decreased spatial extent of histone H2B-K119 ubiquitination at double-strand break site during vegetative growth

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Genotypes:

FYPO:0005610 - decreased spatial extent of protein localization to double-strand break site

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

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Genotypes:

FYPO:0005606 - delayed onset of protein localization to double-strand break site

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Genotypes:

FYPO:0003584 - increased double-strand break repair via nonhomologous end joining

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Genotypes:

FYPO:0005604 - increased duration of Rad52 focus presence during cellular response to ionizing radiation

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FYPO:0005605 - increased duration of Ssb1 focus presence during cellular response to ionizing radiation

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Genotypes:

FYPO:0005611 - increased H4-K20 dimethylation at double-strand break site during vegetative growth

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Genotypes:

FYPO:0002475 - increased protein localization to double-strand break site

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Genotypes:

FYPO:0002061 - inviable vegetative cell population

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FYPO:0000957 - normal growth on methyl methanesulfonate

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Genotypes:

FYPO:0000833 - normal protein level during vegetative growth

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Genotypes:

FYPO:0002554 - normal protein localization to double-strand break site

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Genotypes:

FYPO:0000085 - sensitive to camptothecin

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FYPO:0000088 - sensitive to hydroxyurea

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Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

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Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

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Single locus phenotype

FYPO:0004217 - abolished histone H4-K20 dimethylation during vegetative growth

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Genotypes:

FYPO:0000229 - cut

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Genotypes:

FYPO:0003912 - decreased double-strand break repair via homologous recombination

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

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Genotypes:

FYPO:0003490 - increased duration of mitotic DNA damage checkpoint during cellular response to ionizing radiation

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FYPO:0005603 - increased duration of mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate

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FYPO:0000972 - increased number of Rad52 foci during vegetative growth

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FYPO:0001327 - increased protein level during vegetative growth

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FYPO:0000825 - increased RNA level during vegetative growth

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Genotypes:

FYPO:0004229 - normal growth during cellular response to ionizing radiation

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Genotypes:

FYPO:0000969 - normal growth during cellular response to UV

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Genotypes:

FYPO:0001690 - normal growth on camptothecin

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Genotypes:

FYPO:0000963 - normal growth on hydroxyurea

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Genotypes:

FYPO:0000957 - normal growth on methyl methanesulfonate

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Genotypes:

FYPO:0002554 - normal protein localization to double-strand break site

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Genotypes:

FYPO:0000088 - sensitive to hydroxyurea

Genes:

Genotypes:

FYPO:0000089 - sensitive to methyl methanesulfonate

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Genotypes:

FYPO:0000268 - sensitive to UV during vegetative growth

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Genotypes:

FYPO:0001492 - viable elongated vegetative cell

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Genotypes: