PomBase home

Reference - PMID:27183912 - Translin and Trax differentially regulate telomere-associated transcript homeostasis.

Reference summary

PubMed ID
PMID:27183912
Title
Translin and Trax differentially regulate telomere-associated transcript homeostasis.
Authors
Gomez-Escobar N, Almobadel N, Alzahrani O, Feichtinger J, Planells-Palop V, Alshehri Z, Thallinger GG, Wakeman JA, McFarlane RJ
Citation
Oncotarget 2016 Jun 07;7(23):33809-20
Publication year
2016
Abstract
Translin and Trax proteins are highly conserved nucleic acid binding proteins that have been implicated in RNA regulation in a range of biological processes including tRNA processing, RNA interference, microRNA degradation during oncogenesis, spermatogenesis and neuronal regulation. Here, we explore the function of this paralogue pair of proteins in the fission yeast. Using transcript analysis we demonstrate a reciprocal mechanism for control of telomere-associated transcripts. Mutation of tfx1+ (Trax) elevates transcript levels from silenced sub-telomeric regions of the genome, but not other silenced regions, such as the peri-centromeric heterochromatin. In the case of some sub-telomeric transcripts, but not all, this elevation is dependent on the Trax paralogue, Tsn1 (Translin). In a reciprocal fashion, Tsn1 (Translin) serves to repress levels of transcripts (TERRAs) from the telomeric repeats, whereas Tfx1 serves to maintain these elevated levels. This reveals a novel mechanism for the regulation of telomeric transcripts. We extend this to demonstrate that human Translin and Trax also control telomere-associated transcript levels in human cells in a telomere-specific fashion.

Annotation

Multi-locus phenotype

FYPO:0005602 - normal subtelomeric heterochromatin RNA level

Genes:

Genotypes:

FYPO:0002687 - normal telomere length during vegetative growth

Genes:

Genotypes:

Single locus phenotype

FYPO:0002019 - elongated telomeres during vegetative growth

Genes:

Genotypes:

FYPO:0000220 - increased centromeric outer repeat transcript level

Genes:

Genotypes:

FYPO:0005917 - increased subtelomeric heterochromatin RNA level

Genes:

Genotypes:

FYPO:0002567 - normal centromeric outer repeat transcript level

Genes:

Genotypes:

FYPO:0005602 - normal subtelomeric heterochromatin RNA level

Genes:

Genotypes:

FYPO:0002687 - normal telomere length during vegetative growth

Genes:

Genotypes:

FYPO:0000091 - sensitive to thiabendazole

Genes:

Genotypes: