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Reference - PMID:28218250 - Chromatin remodeller Fun30 Fft3 induces nucleosome disassembly to facilitate RNA polymerase II elongation.

Reference summary

PubMed ID
PMID:28218250
Title
Chromatin remodeller Fun30 Fft3 induces nucleosome disassembly to facilitate RNA polymerase II elongation.
Authors
Lee J, Choi ES, Seo HD, Kang K, Gilmore JM, Florens L, Washburn MP, Choe J, Workman JL, Lee D
Citation
Nat Commun 2017 Feb 20;8:14527
Publication year
2017
Abstract
Previous studies have revealed that nucleosomes impede elongation of RNA polymerase II (RNAPII). Recent observations suggest a role for ATP-dependent chromatin remodellers in modulating this process, but direct in vivo evidence for this is unknown. Here using fission yeast, we identify Fun30 Fft3 as a chromatin remodeller, which localizes at transcribing regions to promote RNAPII transcription. Fun30 Fft3 associates with RNAPII and collaborates with the histone chaperone, FACT, which facilitates RNAPII elongation through chromatin, to induce nucleosome disassembly at transcribing regions during RNAPII transcription. Mutants, resulting in reduced nucleosome-barrier, such as deletion mutants of histones H3/H4 themselves and the genes encoding components of histone deacetylase Clr6 complex II suppress the defects in growth and RNAPII occupancy of cells lacking Fun30 Fft3 . These data suggest that RNAPII utilizes the chromatin remodeller, Fun30 Fft3 , to overcome the nucleosome barrier to transcription elongation.

Annotation

GO biological process

GO:0140673 - transcription elongation-coupled chromatin remodeling

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GO molecular function

GO:0140665 - ATP-dependent H3-H4 histone complex chaperone activity

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Multi-locus phenotype

FYPO:0005951 - decreased nucleosome occupancy at highly transcribed RNA polymerase II genes

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Genotypes:

FYPO:0005948 - decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

Genes:

Genotypes:

FYPO:0005950 - increased nucleosome occupancy at highly transcribed RNA polymerase II genes

Genes:

Genotypes:

FYPO:0005517 - normal growth on 6-azauracil

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Genotypes:

FYPO:0001237 - normal growth on cadmium

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FYPO:0005947 - normal growth on potassium chloride

Genes:

Genotypes:

FYPO:0000961 - normal growth on sorbitol

Genes:

Genotypes:

FYPO:0005952 - normal nucleosome occupancy at highly transcribed RNA polymerase II genes

Genes:

Genotypes:

FYPO:0001357 - normal vegetative cell population growth

Genes:

Genotypes:

FYPO:0000084 - sensitive to 6-azauracil

Genes:

Genotypes:

FYPO:0000096 - sensitive to cadmium

Genes:

Genotypes:

FYPO:0001214 - sensitive to potassium chloride

Genes:

Genotypes:

FYPO:0000112 - sensitive to sorbitol

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Single locus phenotype

FYPO:0005948 - decreased protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth

Genes:

Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

Genes:

Genotypes:

FYPO:0005950 - increased nucleosome occupancy at highly transcribed RNA polymerase II genes

Genes:

Genotypes:

FYPO:0005517 - normal growth on 6-azauracil

Genes:

Genotypes:

FYPO:0001237 - normal growth on cadmium

Genes:

Genotypes:

FYPO:0005947 - normal growth on potassium chloride

Genes:

Genotypes:

FYPO:0000961 - normal growth on sorbitol

Genes:

Genotypes:

FYPO:0005949 - normal protein localization to chromatin at highly transcribed RNA polymerase II genes during vegetative growth

Genes:

Genotypes:

FYPO:0001357 - normal vegetative cell population growth

Genes:

Genotypes:

FYPO:0000096 - sensitive to cadmium

Genes:

Genotypes:

FYPO:0001214 - sensitive to potassium chloride

Genes:

Genotypes: