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Reference - PMID:28552615 - SUMO-Targeted DNA Translocase Rrp2 Protects the Genome from Top2-Induced DNA Damage.

Reference summary

PubMed ID
PMID:28552615
Title
SUMO-Targeted DNA Translocase Rrp2 Protects the Genome from Top2-Induced DNA Damage.
Authors
Wei Y, Diao LX, Lu S, Wang HT, Suo F, Dong MQ, Du LL
Citation
Mol Cell 2017 Jun 01;66(5):581-596.e6
Publication year
2017
Abstract
The action of DNA topoisomerase II (Top2) creates transient DNA breaks that are normally concealed inside Top2-DNA covalent complexes. Top2 poisons, including ubiquitously present natural compounds and clinically used anti-cancer drugs, trap Top2-DNA complexes. Here, we show that cells actively prevent Top2 degradation to avoid the exposure of concealed DNA breaks. A genome-wide screen revealed that fission yeast cells lacking Rrp2, an Snf2-family DNA translocase, are strongly sensitive to Top2 poisons. Loss of Rrp2 enhances SUMOylation-dependent ubiquitination and degradation of Top2, which in turn increases DNA damage at sites where Top2-DNA complexes are trapped. Rrp2 possesses SUMO-binding ability and prevents excessive Top2 degradation by competing against the SUMO-targeted ubiquitin ligase (STUbL) for SUMO chain binding and by displacing SUMOylated Top2 from DNA. The budding yeast homolog of Rrp2, Uls1, plays a similar role, indicating that this genome protection mechanism is widely employed, a finding with implications for cancer treatment.

Annotation

GO biological process

GO:0006281 - DNA repair

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GO:0032435 - negative regulation of proteasomal ubiquitin-dependent protein catabolic process

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GO:0006511 - ubiquitin-dependent protein catabolic process

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GO cellular component

GO:0000785 - chromatin

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GO:0033768 - SUMO-targeted ubiquitin ligase complex

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GO molecular function

GO:0061995 - ATP-dependent protein-DNA complex displacement activity

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GO:0016929 - deSUMOylase activity

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GO:0003677 - DNA binding

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GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity

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GO:0005515 - protein binding

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GO:0031386 - protein tag activity

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GO:0019948 - SUMO activating enzyme activity

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GO:0061656 - SUMO conjugating enzyme activity

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GO:0061665 - SUMO ligase activity

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GO:0004839 - ubiquitin activating enzyme activity

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GO:0061631 - ubiquitin conjugating enzyme activity

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GO:0061630 - ubiquitin protein ligase activity

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Modification

MOD:01149 - sumoylated lysine

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MOD:01148 - ubiquitinylated lysine

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Multi-locus phenotype

FYPO:0000972 - increased number of Rad52 foci during vegetative growth

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FYPO:0002082 - increased protein ubiquitination during vegetative growth

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FYPO:0003858 - sensitive to etoposide

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FYPO:0001492 - viable elongated vegetative cell

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Single locus phenotype

FYPO:0004481 - abolished cell population growth at high temperature

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FYPO:0002779 - abolished protein localization to nucleus, with protein mislocalized to cytoplasm, during vegetative growth

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FYPO:0000705 - abolished protein-protein interaction

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FYPO:0000658 - decreased DNA binding

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FYPO:0002775 - decreased level of sumoylated protein in cell

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FYPO:0002778 - decreased protein sumoylation during vegetative growth

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FYPO:0002768 - decreased protein ubiquitination during vegetative growth

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FYPO:0001645 - decreased protein-protein interaction

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FYPO:0006152 - decreased SUMO-specific protease activity

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FYPO:0002082 - increased protein ubiquitination during vegetative growth

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FYPO:0000969 - normal growth during cellular response to UV

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FYPO:0001690 - normal growth on camptothecin

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FYPO:0006150 - normal growth on etoposide

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FYPO:0001164 - normal growth on glucose carbon source

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FYPO:0000963 - normal growth on hydroxyurea

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FYPO:0000957 - normal growth on methyl methanesulfonate

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FYPO:0000703 - normal protein-protein interaction

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FYPO:0000085 - sensitive to camptothecin

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FYPO:0003559 - sensitive to doxorubicin

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FYPO:0003858 - sensitive to etoposide

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0006149 - sensitive to idarubicin

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0000268 - sensitive to UV during vegetative growth

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FYPO:0005750 - sensitive to Zeocin

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