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Reference - PMID:29043956 - The amino-terminal domain of ELL transcription elongation factor is essential for ELL function in Schizosaccharomyces pombe.

Reference summary

PubMed ID
PMID:29043956
Title
The amino-terminal domain of ELL transcription elongation factor is essential for ELL function in Schizosaccharomyces pombe.
Authors
Sweta K, Dabas P, Jain K, Sharma N
Citation
Microbiology (Reading) 2017 Nov;163(11):1641-1653
Publication year
2017
Abstract
Transcriptional elongation is a critical step for regulating expression of protein-coding genes. Multiple transcription elongation factors have been identified in vitro, but the physiological roles of many of them are still not clearly understood. The ELL (Eleven nineteen Lysine rich Leukemia) family of transcription elongation factors are conserved from fission yeast to humans. Schizosaccharomyces pombe contains a single ELL homolog (SpELL) that is not essential for its survival. Therefore to gain insights into the in vivo cellular functions of SpELL, we identified phenotypes associated with deletion of ell1 in S. pombe. Our results demonstrate that SpELL is required for normal growth of S. pombe cells. Furthermore, cells lacking ell1 + exhibit a decrease in survival when exposed to DNA-damaging conditions, but their growth is not affected under environmental stress conditions. ELL orthologs in different organisms contain three conserved domains, an amino-terminal domain, a middle domain and a carboxyl-terminal domain. We also carried out an in vivo functional mapping of these conserved domains within S. pombe ELL and uncovered a critical role for its amino-terminus in regulating all its cellular functions, including growth under different conditions, transcriptional elongation potential and interaction with S. pombe EAF. Taken together our results suggest that the domain organization of ELL proteins is conserved across species, but the in vivo functions as well as the relationship between the various domains and roles of ELL show species-specific differences.

Annotation

Complementation

PBO:0091755 - functionally complemented by human ELL

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GO cellular component

GO:0005634 - nucleus

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GO molecular function

GO:0005515 - protein binding

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Single locus phenotype

FYPO:0000705 - abolished protein-protein interaction

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FYPO:0001187 - decreased cell density in stationary phase

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FYPO:0001645 - decreased protein-protein interaction

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FYPO:0000636 - increased cell population growth rate

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FYPO:0004557 - increased vegetative cell population growth

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FYPO:0006902 - loss of viability following cellular response to 4-nitroquinoline N-oxide

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FYPO:0005705 - loss of viability following cellular response to UV

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FYPO:0000674 - normal cell population growth at high temperature

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FYPO:0000969 - normal growth during cellular response to UV

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FYPO:0001689 - normal growth on 4-nitroquinoline N-oxide

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FYPO:0005517 - normal growth on 6-azauracil

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FYPO:0000963 - normal growth on hydroxyurea

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FYPO:0000957 - normal growth on methyl methanesulfonate

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FYPO:0000961 - normal growth on sorbitol

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FYPO:0006553 - normal protein localization to nucleus

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FYPO:0000703 - normal protein-protein interaction

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FYPO:0001310 - normal viability in stationary phase

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FYPO:0001098 - sensitive to 4-nitroquinoline N-oxide

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FYPO:0000084 - sensitive to 6-azauracil

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0002550 - sensitive to UV

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FYPO:0001234 - slow vegetative cell population growth

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