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Reference - PMID:29214404 - The 19S proteasome regulates subtelomere silencing and facultative heterochromatin formation in fission yeast.

Reference summary

PubMed ID
PMID:29214404
Title
The 19S proteasome regulates subtelomere silencing and facultative heterochromatin formation in fission yeast.
Authors
Seo HD, Kwon CS, Lee D
Citation
Curr Genet 2018 Jun;64(3):741-752
Publication year
2018
Abstract
Accumulating evidence shows that non-proteolytic functions of the proteasome are as crucial as its well-known proteolytic function in regulating cellular activities. In our recent work, we showed that the 19S proteasome mediates the heterochromatin spreading of centromeric heterochromatin in non-proteolytic manner. However, the involvement of the proteasome in other heterochromatin regions remained largely unknown. In the present study, we investigated the non-proteolytic role of the 19S proteasome in subtelomere and facultative heterochromatin regions. Using the non-proteolytic mutant, rpt4-1, we show that the 19S proteasome is involved in regulating subtelomere silencing and facultative heterochromatin formation in fission yeast. In addition to this proteasome-related regulation, we also observed a distinct pathway that regulates subtelomere silencing and facultative heterochromatin formation through the Paf1 complex subunit, Leo1. Our comparison of the two pathways revealed a new group of heterochromatin domains that are regulated exclusively by the proteasome pathway. Taken together, our findings reveal that the proteasome is involved in the global regulation of facultative and constitutive heterochromatin.

Annotation

GO cellular component

GO:0000792 - heterochromatin

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Multi-locus phenotype

FYPO:0004542 - increased chromatin silencing at subtelomere

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FYPO:0006369 - increased histone H3-K9 dimethylation at heterochromatin domain during vegetative growth

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FYPO:0006373 - increased histone H3-K9 dimethylation at heterochromatin island during vegetative growth

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FYPO:0006361 - increased histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth

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FYPO:0006368 - normal spatial extent of centromeric heterochromatin assembly

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Single locus phenotype

FYPO:0004137 - decreased histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth

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FYPO:0003230 - decreased histone H3-K9 methylation at heterochromatin island during vegetative growth

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FYPO:0005918 - decreased protein localization to subtelomeric heterochromatin

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FYPO:0005286 - heterochromatin assembly beyond boundary element IRC1L

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FYPO:0004542 - increased chromatin silencing at subtelomere

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Genotypes:

FYPO:0006369 - increased histone H3-K9 dimethylation at heterochromatin domain during vegetative growth

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Genotypes:

FYPO:0006373 - increased histone H3-K9 dimethylation at heterochromatin island during vegetative growth

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FYPO:0006361 - increased histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth

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FYPO:0000873 - increased histone H3-K9 dimethylation during vegetative growth

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FYPO:0006109 - increased subtelomeric transcript-derived siRNA level

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FYPO:0005080 - normal protein localization to heterochromatin at centromere inner repeat

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FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

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FYPO:0003576 - normal protein localization to subtelomeric heterochromatin

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FYPO:0006368 - normal spatial extent of centromeric heterochromatin assembly

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