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Reference - PMID:29215009 - The end-joining factor Ku acts in the end-resection of double strand break-free arrested replication forks.

Reference summary

PubMed ID
PMID:29215009
Title
The end-joining factor Ku acts in the end-resection of double strand break-free arrested replication forks.
Authors
Teixeira-Silva A, Ait Saada A, Hardy J, Iraqui I, Nocente MC, Fréon K, Lambert SAE
Citation
Nat Commun 2017 Dec 07;8(1):1982
Publication year
2017
Abstract
Replication requires homologous recombination (HR) to stabilize and restart terminally arrested forks. HR-mediated fork processing requires single stranded DNA (ssDNA) gaps and not necessarily double strand breaks. We used genetic and molecular assays to investigate fork-resection and restart at dysfunctional, unbroken forks in Schizosaccharomyces pombe. Here, we report that fork-resection is a two-step process regulated by the non-homologous end joining factor Ku. An initial resection mediated by MRN-Ctp1 removes Ku from terminally arrested forks, generating ~110 bp sized gaps obligatory for subsequent Exo1-mediated long-range resection and replication restart. The mere lack of Ku impacts the processing of arrested forks, leading to an extensive resection, a reduced recruitment of RPA and Rad51 and a slower fork-restart process. We propose that terminally arrested forks undergo fork reversal, providing a single DNA end for Ku binding. We uncover a role for Ku in regulating end-resection of unbroken forks and in fine-tuning HR-mediated replication restart.

Annotation

GO biological process

GO:1990426 - mitotic recombination-dependent replication fork processing

Genes:

GO:0031297 - replication fork processing

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Multi-locus phenotype

FYPO:0006087 - abolished DNA resection during replication fork processing

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FYPO:0006318 - decreased DNA resection during replication fork processing

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Genotypes:

FYPO:0003589 - decreased replication slippage during replication fork processing

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FYPO:0006323 - loss of viability following replication fork stalling

Genes:

Genotypes:

FYPO:0006319 - normal extent of DNA resection during replication fork processing

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FYPO:0006320 - normal replication slippage during replication fork processing

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Single locus phenotype

FYPO:0006087 - abolished DNA resection during replication fork processing

Genes:

Genotypes:

FYPO:0006318 - decreased DNA resection during replication fork processing

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Genotypes:

FYPO:0006321 - decreased protein localization to chromatin at stalled replication fork

Genes:

Genotypes:

FYPO:0003589 - decreased replication slippage during replication fork processing

Genes:

Genotypes:

FYPO:0004003 - delayed onset of replication fork processing

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Genotypes:

FYPO:0004251 - increased DNA resection during replication fork processing

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Genotypes:

FYPO:0006322 - increased protein localization to chromatin at stalled replication fork

Genes:

Genotypes:

FYPO:0006323 - loss of viability following replication fork stalling

Genes:

Genotypes:

FYPO:0006319 - normal extent of DNA resection during replication fork processing

Genes:

Genotypes:

FYPO:0005236 - normal protein localization to chromatin at stalled replication fork

Genes:

Genotypes:

FYPO:0006320 - normal replication slippage during replication fork processing

Genes:

Genotypes: