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Reference - PMID:29932902 - mRNA Deadenylation Is Coupled to Translation Rates by the Differential Activities of Ccr4-Not Nucleases.

Reference summary

PubMed ID
PMID:29932902
Title
mRNA Deadenylation Is Coupled to Translation Rates by the Differential Activities of Ccr4-Not Nucleases.
Authors
Webster MW, Chen YH, Stowell JAW, Alhusaini N, Sweet T, Graveley BR, Coller J, Passmore LA
Citation
Mol Cell 2018 Jun 21;70(6):1089-1100.e8
Publication year
2018
Abstract
Translation and decay of eukaryotic mRNAs is controlled by shortening of the poly(A) tail and release of the poly(A)-binding protein Pab1/PABP. The Ccr4-Not complex contains two exonucleases-Ccr4 and Caf1/Pop2-that mediate mRNA deadenylation. Here, using a fully reconstituted biochemical system with proteins from the fission yeast Schizosaccharomyces pombe, we show that Pab1 interacts with Ccr4-Not, stimulates deadenylation, and differentiates the roles of the nuclease enzymes. Surprisingly, Pab1 release relies on Ccr4 activity. In agreement with this, in vivo experiments in budding yeast show that Ccr4 is a general deadenylase that acts on all mRNAs. In contrast, Caf1 only trims poly(A) not bound by Pab1. As a consequence, Caf1 is a specialized deadenylase required for the selective deadenylation of transcripts with lower rates of translation elongation and reduced Pab1 occupancy. These findings reveal a coupling between the rates of translation and deadenylation that is dependent on Pab1 and Ccr4-Not.

Annotation

GO biological process

GO:0000289 - nuclear-transcribed mRNA poly(A) tail shortening

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GO molecular function

GO:0008143 - poly(A) binding

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GO:0004535 - poly(A)-specific ribonuclease activity

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Single locus phenotype

FYPO:0000705 - abolished protein-protein interaction

Genes:

Genotypes:

FYPO:0006788 - decreased poly(A)-specific ribonuclease activity

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Genotypes:

FYPO:0001645 - decreased protein-protein interaction

Genes:

Genotypes:

FYPO:0006789 - normal poly(A)-specific ribonuclease activity

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Genotypes: