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Reference - PMID:29958934 - Schizosaccharomyces pombe cardiolipin synthase is part of a mitochondrial fusion protein regulated by intron retention.

Reference summary

PubMed ID
PMID:29958934
Title
Schizosaccharomyces pombe cardiolipin synthase is part of a mitochondrial fusion protein regulated by intron retention.
Authors
Virčíková V, Pokorná L, Tahotná D, Džugasová V, Balážová M, Griač P
Citation
Biochim Biophys Acta Mol Cell Biol Lipids 2018 Oct;1863(10):1331-1344
Publication year
2018
Abstract
Cardiolipin (CL) is a unique lipid component of mitochondria in all eukaryotes. It is important for the architecture of mitochondrial membranes and for mitochondrial dynamics. CL also creates a highly specific microenvironment of mitochondrial protein machineries. CL biosynthetic pathway is, however, only partially characterized in the fission yeast Schizosaccharomyces pombe. Here we show that CL synthase is an essential protein in S. pombe. It is encoded by the ORF SPAC22A12.08c as a C terminal part of a tandem fusion protein together with a mitochondrial hydrolase of unknown function. Expression of S. pombe CL synthase is able to complement deletion of the CRD1 gene of Saccharomyces cerevisiae and, vice versa, S. cerevisiae CRD1 gene complements deletion of S. pombe SPAC22A12.08c. The proper expression of CL synthase and its partner in the tandem protein, the mitochondrial hydrolase, is regulated at the level of alternate intron splicing. The first part of the SPAC22A12.08c fusion protein could be translated from both major SPAC22A12.08c derived mRNAs, with and without intron IV. Functional CL synthase, however, is produced only from the minor SPAC22A12.08c derived mRNA that has intron IV retained. Thus, intron retention is a novel mechanism for the differential expression of two proteins that evolved as a fusion protein and are under the control of the same promoter.

Annotation

Comment

PBO:0091300 - retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein

Genes:

PBO:0091303 - splicing of all introns, including intron IV, introduces stop codon that leads to production of mitochondrial hydrolase instead of tandem hydrolase/cardiolipin fusion protein

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PBO:0091301 - transcript retaining intron IV represents 15% of total mRNA

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PBO:0091304 - transcript with all introns spliced represents 85% of total mRNA

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Complementation

PBO:0091299 - functionally complemented by S. cerevisiae CRD1

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PBO:0091298 - functionally complements S. cerevisiae CRD1

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GO biological process

GO:0032049 - cardiolipin biosynthetic process

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GO:0055091 - phospholipid homeostasis

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GO cellular component

GO:0005739 - mitochondrion

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GO molecular function

GO:0043337 - cardiolipin synthase (CMP-forming) activity

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Genome organisation

PBO:0002475 - alternative splicing

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Protein sequence feature

SO:0100011 - cleaved_peptide_region

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Single locus phenotype

FYPO:0001422 - decreased protein processing during vegetative growth

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Genotypes:

FYPO:0002061 - inviable vegetative cell population

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Genotypes:

FYPO:0002060 - viable vegetative cell population

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Genotypes:

Warnings

PBO:0000070 - gene structure updated

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