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Reference - PMID:30155942 - Sfh1, an essential component of the RSC chromatin remodeling complex, maintains genome integrity in fission yeast.

Reference summary

PubMed ID
PMID:30155942
Title
Sfh1, an essential component of the RSC chromatin remodeling complex, maintains genome integrity in fission yeast.
Authors
Kotomura N, Tsunemine S, Kuragano M, Asanuma T, Nakagawa H, Tanaka K, Murakami Y
Citation
Genes Cells 2018 Sep;23(9):738-752
Publication year
2018
Abstract
Abp1 is a fission yeast CENP-B homologue that contributes to centromere function, silencing at pericentromeric heterochromatin and silencing of retrotransposons. We identified the sfh1 gene, encoding a core subunit of the fission yeast chromatin remodeling complex RSC as an Abp1-interacting protein. Because sfh1 is essential for growth, we isolated temperature-sensitive sfh1 mutants. These mutants showed defects in centromere functions, reflected by sensitivity to an inhibitor of spindle formation and minichromosome instability. Sfh1 localized at both kinetochore and pericentromeric heterochromatin regions. Although sfh1 mutations had minor effect on silencing at these regions, they decreased the levels of cohesin on centromeric heterochromatin. Sfh1 also localized at a retrotransposon, Tf2, in a partly Abp1-dependent manner, and assisted in silencing of Tf2 by Abp1 probably in the same pathway as a histone chaperon, HIRA, which is also known to involve in Tf2 repression. Furthermore, sfh1 mutants were sensitive to several DNA-damaging treatments (HU, MMS, UV and X-ray). Increase in spontaneous foci of Rad22, a recombination Mediator protein Rad52 homologue, in sfh1 mutant suggests that RSC functions in homologous recombination repair of double-stranded break downstream of the Rad22 recruitment. These results indicate that RSC plays multiple roles in the maintenance of genome integrity.

Annotation

GO cellular component

GO:0005634 - nucleus

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Multi-locus phenotype

FYPO:0005932 - decreased nucleosome occupancy at long terminal repeat

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FYPO:0003105 - increased transposable element-derived small RNA level

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Single locus phenotype

FYPO:0003730 - abolished cell population growth on galactose carbon source

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FYPO:0001270 - complete but unequal mitotic sister chromatid segregation

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FYPO:0000082 - decreased cell population growth at high temperature

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FYPO:0001162 - decreased cell population growth on raffinose carbon source

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FYPO:0001176 - decreased cell population growth on sucrose carbon source

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FYPO:0005932 - decreased nucleosome occupancy at long terminal repeat

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FYPO:0002842 - decreased protein localization to centromere outer repeat

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FYPO:0006599 - decreased protein localization to centromeric chromatin during vegetative growth

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FYPO:0004345 - decreased protein localization to chromatin at long terminal repeat

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FYPO:0008249 - decreased protein localization to chromatin at protein coding gene

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FYPO:0005371 - increased linear minichromosome loss during vegetative growth

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FYPO:0000972 - increased number of Rad52 foci during vegetative growth

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FYPO:0003105 - increased transposable element-derived small RNA level

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FYPO:0004922 - inviable elongated mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition

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FYPO:0001387 - loss of viability at high temperature

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FYPO:0000961 - normal growth on sorbitol

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FYPO:0001174 - normal growth on sucrose carbon source

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FYPO:0000863 - normal histone H3-K9 dimethylation at centromere inner repeat during vegetative growth

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FYPO:0004743 - normal histone H3-K9 dimethylation at centromere outer repeat during vegetative growth

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FYPO:0001839 - normal minichromosome loss

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FYPO:0008457 - normal nucleosome occupancy at long terminal repeat region

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FYPO:0005079 - normal protein localization to chromatin at centromere central core

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FYPO:0005082 - normal protein localization to chromatin at long terminal repeat

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FYPO:0005080 - normal protein localization to heterochromatin at centromere inner repeat

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FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

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FYPO:0004579 - normal transposable element-derived small RNA level

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FYPO:0009039 - resistance to potassium chloride

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FYPO:0000842 - sensitive to ethanol during vegetative growth

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FYPO:0000785 - sensitive to formamide

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FYPO:0000088 - sensitive to hydroxyurea

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FYPO:0000089 - sensitive to methyl methanesulfonate

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FYPO:0001214 - sensitive to potassium chloride

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FYPO:0005889 - sensitive to sodium chloride

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FYPO:0000091 - sensitive to thiabendazole

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FYPO:0000268 - sensitive to UV during vegetative growth

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FYPO:0009063 - sensitive to X-rays during vegetative growth

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