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Reference - PMID:30282034 - Elongation/Termination Factor Exchange Mediated by PP1 Phosphatase Orchestrates Transcription Termination.

Reference summary

PubMed ID
PMID:30282034
Title
Elongation/Termination Factor Exchange Mediated by PP1 Phosphatase Orchestrates Transcription Termination.
Authors
Kecman T, Kuś K, Heo DH, Duckett K, Birot A, Liberatori S, Mohammed S, Geis-Asteggiante L, Robinson CV, Vasiljeva L
Citation
Cell Rep 2018 Oct 02;25(1):259-269.e5
Publication year
2018
Abstract
Termination of RNA polymerase II (Pol II) transcription is a key step that is important for 3' end formation of functional mRNA, mRNA release, and Pol II recycling. Even so, the underlying termination mechanism is not yet understood. Here, we demonstrate that the conserved and essential termination factor Seb1 is found on Pol II near the end of the RNA exit channel and the Rpb4/7 stalk. Furthermore, the Seb1 interaction surface with Pol II largely overlaps with that of the elongation factor Spt5. Notably, Seb1 co-transcriptional recruitment is dependent on Spt5 dephosphorylation by the conserved PP1 phosphatase Dis2, which also dephosphorylates threonine 4 within the Pol II heptad repeated C-terminal domain. We propose that Dis2 orchestrates the transition from elongation to termination phase during the transcription cycle by mediating elongation to termination factor exchange and dephosphorylation of Pol II C-terminal domain.

Annotation

GO biological process

GO:1904595 - positive regulation of termination of RNA polymerase II transcription

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GO molecular function

GO:0004722 - protein serine/threonine phosphatase activity

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GO:0180005 - RNA polymerase II CTD heptapeptide repeat T4 phosphatase activity

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Multi-locus phenotype

FYPO:0007536 - normal protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth

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Single locus phenotype

FYPO:0006020 - abnormal protein distribution along RNA polymerase II-transcribed genes

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Genotypes:

FYPO:0004161 - decreased protein localization to chromatin at RNA polymerase II-transcribed genes during vegetative growth

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FYPO:0007534 - increased phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth

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FYPO:0006614 - increased termination of RNA polymerase II transcription

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FYPO:0002061 - inviable vegetative cell population

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FYPO:0007535 - normal phosphorylation of RNA polymerase II C-terminal domain serine 2 residues during vegetative growth

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FYPO:0005061 - normal phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth

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FYPO:0007539 - normal phosphorylation of RNA polymerase II C-terminal domain threonine 4 residues during vegetative growth

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FYPO:0007540 - normal phosphorylation of RNA polymerase II C-terminal domain tyrosine 1 residues during vegetative growth

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FYPO:0002060 - viable vegetative cell population

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