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Reference - PMID:31837996 - The Chaperone FACT and Histone H2B Ubiquitination Maintain S. pombe Genome Architecture through Genic and Subtelomeric Functions.

Reference summary

PubMed ID
PMID:31837996
Title
The Chaperone FACT and Histone H2B Ubiquitination Maintain S. pombe Genome Architecture through Genic and Subtelomeric Functions.
Authors
Murawska M, Schauer T, Matsuda A, Wilson MD, Pysik T, Wojcik F, Muir TW, Hiraoka Y, Straub T, Ladurner AG
Citation
Mol Cell 2020 Feb 06;77(3):501-513.e7
Publication year
2020
Abstract
The histone chaperone FACT and histone H2B ubiquitination (H2Bub) facilitate RNA polymerase II (Pol II) passage through chromatin, yet it is not clear how they cooperate mechanistically. We used genomics, genetic, biochemical, and microscopic approaches to dissect their interplay in Schizosaccharomyces pombe. We show that FACT and H2Bub globally repress antisense transcripts near the 5' end of genes and inside gene bodies, respectively. The accumulation of these transcripts is accompanied by changes at genic nucleosomes and Pol II redistribution. H2Bub is required for FACT activity in genic regions. In the H2Bub mutant, FACT binding to chromatin is altered and its association with histones is stabilized, which leads to the reduction of genic nucleosomes. Interestingly, FACT depletion globally restores nucleosomes in the H2Bub mutant. Moreover, in the absence of Pob3, the FACT Spt16 subunit controls the 3' end of genes. Furthermore, FACT maintains nucleosomes in subtelomeric regions, which is crucial for their compaction.

Annotation

GO biological process

GO:0006338 - chromatin remodeling

Genes:

GO:0031509 - subtelomeric heterochromatin formation

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GO molecular function

GO:0000511 - H2A-H2B histone complex chaperone activity

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Multi-locus phenotype

FYPO:0000854 - abnormal nucleosome positioning in euchromatin

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Genotypes:

FYPO:0007837 - decreased nucleosome occupancy at subtelomere

Genes:

Genotypes:

FYPO:0005528 - decreased subtelomeric chromatin knob formation

Genes:

Genotypes:

FYPO:0002913 - increased antisense RNA transcription

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Genotypes:

FYPO:0005917 - increased subtelomeric heterochromatin RNA level

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Genotypes:

Single locus phenotype

FYPO:0000854 - abnormal nucleosome positioning in euchromatin

Genes:

Genotypes:

FYPO:0007837 - decreased nucleosome occupancy at subtelomere

Genes:

Genotypes:

FYPO:0005528 - decreased subtelomeric chromatin knob formation

Genes:

Genotypes:

FYPO:0002913 - increased antisense RNA transcription

Genes:

Genotypes:

FYPO:0007835 - increased histone binding

Genes:

Genotypes:

FYPO:0007836 - increased nucleosome occupancy at subtelomere

Genes:

Genotypes:

FYPO:0005917 - increased subtelomeric heterochromatin RNA level

Genes:

Genotypes:

FYPO:0007834 - protein displaced from 5' end to 3' end of RNA polymerase II-transcribed genes

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Genotypes: