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Reference - PMID:33378674 - The INO80 Complex Regulates Epigenetic Inheritance of Heterochromatin.

Reference summary

PubMed ID
PMID:33378674
Title
The INO80 Complex Regulates Epigenetic Inheritance of Heterochromatin.
Authors
Shan CM, Bao K, Diedrich J, Chen X, Lu C, Yates JR, Jia S
Citation
Cell Rep 2020 Dec 29;33(13):108561
Publication year
2020
Abstract
One key aspect of epigenetic inheritance is that chromatin structures can be stably inherited through generations after the removal of the signals that establish such structures. In fission yeast, the RNA interference (RNAi) pathway is critical for the targeting of histone methyltransferase Clr4 to pericentric repeats to establish heterochromatin. However, pericentric heterochromatin cannot be properly inherited in the absence of RNAi, suggesting the existence of mechanisms that counteract chromatin structure inheritance. Here, we show that mutations of components of the INO80 chromatin-remodeling complex allow pericentric heterochromatin inheritance in RNAi mutants. The ability of INO80 to counter heterochromatin inheritance is attributed to one subunit, Iec5, which promotes histone turnover at heterochromatin but has little effects on nucleosome positioning at heterochromatin, gene expression, or the DNA damage response. These analyses demonstrate the importance of the INO80 chromatin-remodeling complex in controlling heterochromatin inheritance and maintaining the proper heterochromatin landscape of the genome.

Annotation

GO biological process

GO:0006335 - DNA replication-dependent chromatin assembly

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GO cellular component

GO:0031011 - Ino80 complex

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GO:0005634 - nucleus

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Multi-locus phenotype

FYPO:0006993 - decreased chromatin silencing at centromere otr1R

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Genotypes:

FYPO:0007224 - decreased heterochromatin assembly at centromere outer repeat during vegetative growth

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Genotypes:

FYPO:0004761 - increased histone exchange at pericentric heterochromatin

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Genotypes:

FYPO:0006992 - normal chromatin silencing at centromere otr1R

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Genotypes:

FYPO:0000964 - normal growth on thiabendazole

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Genotypes:

FYPO:0004744 - normal heterochromatin maintenance involved in chromatin silencing at centromere outer repeat

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Genotypes:

FYPO:0007001 - normal histone exchange at pericentric heterochromatin

Genes:

Genotypes:

FYPO:0003235 - normal histone H3-K9 methylation at centromere outer repeat during vegetative growth

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Genotypes:

FYPO:0000091 - sensitive to thiabendazole

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Single locus phenotype

FYPO:0001424 - abolished protein localization to nucleus during vegetative growth

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Genotypes:

FYPO:0000835 - decreased protein level

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FYPO:0000220 - increased centromeric outer repeat transcript level

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FYPO:0004544 - increased duration of heterochromatin maintenance

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Genotypes:

FYPO:0004761 - increased histone exchange at pericentric heterochromatin

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Genotypes:

FYPO:0006373 - increased histone H3-K9 dimethylation at heterochromatin island during vegetative growth

Genes:

Genotypes:

FYPO:0006992 - normal chromatin silencing at centromere otr1R

Genes:

Genotypes:

FYPO:0000964 - normal growth on thiabendazole

Genes:

Genotypes:

FYPO:0007001 - normal histone exchange at pericentric heterochromatin

Genes:

Genotypes:

FYPO:0003235 - normal histone H3-K9 methylation at centromere outer repeat during vegetative growth

Genes:

Genotypes:

FYPO:0000856 - normal nucleosome positioning

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Genotypes:

FYPO:0004083 - normal protein level

Genes:

Genotypes:

FYPO:0002389 - normal protein localization to heterochromatin at centromere outer repeat

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Genotypes:

FYPO:0000703 - normal protein-protein interaction

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Genotypes:

FYPO:0000095 - sensitive to bleomycin

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Genotypes: