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Reference - PMID:33534698 - Tripartite suppression of fission yeast TORC1 signaling by the GATOR1-Sea3 complex, the TSC complex, and Gcn2 kinase.

Reference summary

PubMed ID
PMID:33534698
Title
Tripartite suppression of fission yeast TORC1 signaling by the GATOR1-Sea3 complex, the TSC complex, and Gcn2 kinase.
Authors
Fukuda T, Sofyantoro F, Tai YT, Chia KH, Matsuda T, Murase T, Morozumi Y, Tatebe H, Kanki T, Shiozaki K
Citation
Elife 2021 Feb 03;10
Publication year
2021
Abstract
Mammalian target of rapamycin complex 1 (TORC1) is controlled by the GATOR complex composed of the GATOR1 subcomplex and its inhibitor, the GATOR2 subcomplex, sensitive to amino acid starvation. Previously, we identified fission yeast GATOR1 that prevents deregulated activation of TORC1 (Chia et al., 2017). Here, we report identification and characterization of GATOR2 in fission yeast. Unexpectedly, the GATOR2 subunit Sea3, an ortholog of mammalian WDR59, is physically and functionally proximal to GATOR1, rather than GATOR2, attenuating TORC1 activity. The fission yeast GATOR complex is dispensable for TORC1 regulation in response to amino acid starvation, which instead activates the Gcn2 pathway to inhibit TORC1 and induce autophagy. On the other hand, nitrogen starvation suppresses TORC1 through the combined actions of the GATOR1-Sea3 complex, the Gcn2 pathway, and the TSC complex, another conserved TORC1 inhibitor. Thus, multiple, parallel signaling pathways implement negative regulation of TORC1 to ensure proper cellular starvation responses.

Annotation

GO biological process

GO:0140469 - GCN2-mediated signaling

Genes:

GO:1904262 - negative regulation of TORC1 signaling

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GO:0010508 - positive regulation of autophagy

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GO:0010508 - positive regulation of autophagy

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GO cellular component

GO:1990130 - GATOR1 complex

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GO:0061700 - GATOR2 complex

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GO:0035859 - Seh1-associated complex

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GO:0005774 - vacuolar membrane

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GO molecular function

GO:0004694 - eukaryotic translation initiation factor 2alpha kinase activity

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GO:0005096 - GTPase activator activity

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GO:0035591 - signaling adaptor activity

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Multi-locus phenotype

FYPO:0006295 - abolished macroautophagy during nitrogen starvation

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FYPO:0001355 - decreased vegetative cell population growth

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FYPO:0001357 - normal vegetative cell population growth

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Qualitative gene expression

PomGeneEx:0000018 - protein level increased

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Single locus phenotype

FYPO:0007803 - abolished macroautophagy during leucine starvation

Genes:

Genotypes:

FYPO:0006295 - abolished macroautophagy during nitrogen starvation

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Genotypes:

FYPO:0004250 - abolished protein localization to vacuolar membrane

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Genotypes:

FYPO:0006398 - abolished protein phosphorylation during cellular response to leucine starvation

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Genotypes:

FYPO:0000705 - abolished protein-protein interaction

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Genotypes:

FYPO:0007826 - decreased protein level during cellular response to leucine starvation

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Genotypes:

FYPO:0001645 - decreased protein-protein interaction

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Genotypes:

FYPO:0001355 - decreased vegetative cell population growth

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Genotypes:

FYPO:0006345 - increased duration of protein phosphorylation during nitrogen starvation

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FYPO:0000385 - normal macroautophagy

Genes:

Genotypes:

FYPO:0006294 - normal macroautophagy during nitrogen starvation

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Genotypes:

FYPO:0004248 - normal protein localization to vacuolar membrane

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Genotypes:

FYPO:0001357 - normal vegetative cell population growth

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Genotypes: