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Reference - PMID:33568651 - Replication dynamics of recombination-dependent replication forks.

Reference summary

PubMed ID
PMID:33568651
Title
Replication dynamics of recombination-dependent replication forks.
Authors
Naiman K, Campillo-Funollet E, Watson AT, Budden A, Miyabe I, Carr AM
Citation
Nat Commun 2021 Feb 10;12(1):923
Publication year
2021
Abstract
Replication forks restarted by homologous recombination are error prone and replicate both strands semi-conservatively using Pol δ. Here, we use polymerase usage sequencing to visualize in vivo replication dynamics of HR-restarted forks at an S. pombe replication barrier, RTS1, and model replication by Monte Carlo simulation. We show that HR-restarted forks synthesise both strands with Pol δ for up to 30 kb without maturing to a δ/ε configuration and that Pol α is not used significantly on either strand, suggesting the lagging strand template remains as a gap that is filled in by Pol δ later. We further demonstrate that HR-restarted forks progress uninterrupted through a fork barrier that arrests canonical forks. Finally, by manipulating lagging strand resection during HR-restart by deleting pku70, we show that the leading strand initiates replication at the same position, signifying the stability of the 3' single strand in the context of increased resection.

Annotation

Multi-locus phenotype

FYPO:0006321 - decreased protein localization to chromatin at stalled replication fork

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Single locus phenotype

FYPO:0007681 - abnormal RNA-DNA hybrid ribonuclease activity

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FYPO:0004251 - increased DNA resection during replication fork processing

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FYPO:0007679 - increased replication fork arrest at RTS1 barrier

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FYPO:0007680 - increased ribonucleotide incorporation into DNA

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FYPO:0005031 - increased ribonucleotide incorporation on lagging strand

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FYPO:0007254 - normal replication fork processing

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